f1f1225f-4247-43a3-83de-7fbd2dca7e92 http://ipt.gbif.pt/ipt/resource?r=ibi_lucanidae The InBIO Barcoding Initiative Database: Portuguese Stag beetles (Coleoptera, Lucanidae) Sónia Ferreira CIBIO-InBIO, Centro de Investigação em Biodiversidade e Recursos Genéticos, Universidade do Porto Post-Doc Researcher
Campus Agrário de Vairão, Rua Padre Armando Quintas, nº 7 Vairão Porto 4485-661 PT
+351 252660411 hiporame@gmail.com 0000-0002-6884-3966
Luís P. da Silva CIBIO-InBIO, Centro de Investigação em Biodiversidade e Recursos Genéticos, Universidade do Porto Post-Doc Researcher
Campus Agrário de Vairão, Rua Padre Armando Quintas, nº 7 Vairão Porto 4485-661 PT
+351 252660411 lfpascoals@gmail.com 0000-0003-2358-1277
Pedro Sousa CIBIO-InBIO, Centro de Investigação em Biodiversidade e Recursos Genéticos, Universidade do Porto Post-Doc Researcher
Campus Agrário de Vairão, Rua Padre Armando Quintas, nº 7 Vairão Porto 4485-661 PT
+351 252660411 psousa@cibio.up.pt 0000-0002-5859-9656
Pedro Beja CIBIO-InBIO, Centro de Investigação em Biodiversidade e Recursos Genéticos, Universidade do Porto Coordinating Researcher
Campus Agrário de Vairão, Rua Padre Armando Quintas, nº 7 Vairão Porto 4485-661 PT
+351 252660411 pbeja@cibio.up.pt 0000-0001-8164-0760
Sónia Ferreira CIBIO-InBIO, Centro de Investigação em Biodiversidade e Recursos Genéticos, Universidade do Porto Post-Doc Researcher
Campus Agrário de Vairão, Rua Padre Armando Quintas, nº 7 Vairão Porto 4485-661 PT
+351 252660411 hiporame@gmail.com 0000-0002-6884-3966
Luís P. da Silva CIBIO-InBIO, Centro de Investigação em Biodiversidade e Recursos Genéticos, Universidade do Porto Post-Doc Researcher
Campus Agrário de Vairão, Rua Padre Armando Quintas, nº 7 Vairão Porto 4485-661 PT
+351 252660411 lfpascoals@gmail.com 0000-0003-2358-1277
Pedro Sousa CIBIO-InBIO, Centro de Investigação em Biodiversidade e Recursos Genéticos, Universidade do Porto Post-Doc Researcher
Campus Agrário de Vairão, Rua Padre Armando Quintas, nº 7 Vairão Porto 4485-661 PT
+351 252660411 psousa@cibio.up.pt 0000-0002-5859-9656
Pedro Beja CIBIO-InBIO, Centro de Investigação em Biodiversidade e Recursos Genéticos, Universidade do Porto Coordinating Researcher
Campus Agrário de Vairão, Rua Padre Armando Quintas, nº 7 Vairão Porto 4485-661 PT
+351 252660411 pbeja@cibio.up.pt 0000-0001-8164-0760
2020-06-25 eng The dataset contains 11 records of Stag beetle (Lucanidae) species collected from 2015 to 2019 in continental Portugal. All specimens were identified to species level, and belong to 3 species of the Lucanidae (Coleoptera). Specimens were detected during fieldwork by direct search and stored in 96% ethanol. A tissue sample (a leg), was collected from each individual, from which DNA was extracted. The DNA barcoding of these specimens was conducted within the InBIO Barcoding Initiative (IBI), funded by EnvMetaGen and PORBIOTA projects. DNA barcode sequences available were deposited in BOLD (Barcode of Life Data System) online database. Preserved specimens and DNA extracts are deposited in the IBI collection at the CIBIO (Research Center in Biodiversity and Genetic Resources). Coleoptera n/a Lucanidae n/a Species n/a Cytochrome c oxidase I (COI) n/a DNA barcode n/a Continental Portugal n/a Occurrence GBIF Dataset Type Vocabulary: http://rs.gbif.org/vocabulary/gbif/dataset_type.xml Specimen GBIF Dataset Subtype Vocabulary: http://rs.gbif.org/vocabulary/gbif/dataset_subtype.xml This work is licensed under a Creative Commons Attribution (CC-BY) 4.0 License. http://boldsystems.org Continental Portugal -9 -6.7 41.9 37 2015-06-17 2019-09-19 This dataset is composed of data relating to 11 Lucanidae (Coleoptera) specimens. All specimens were determined to species level. Three of the four Stag beetle species known to occur in continental Portugal are represented in the dataset, with Dorcus parallelipipedus as the most represented species in the dataset, accounting for seven of the eleven specimens. kingdom Animalia phylum Arthropoda class Insecta order Coleoptera family Lucanidae The InBIO Barcoding Initiative (IBI) aims to develop a reference collection of DNA barcoding sequences primarily covering Portuguese invertebrate taxa providing a tool in ecological studies. unkown Pedro Beja CIBIO-InBIO, Centro de Investigação em Biodiversidade e Recursos Genéticos, Universidade do Porto Coordinating Researcher
Campus Agrário de Vairão, Rua Padre Armando Quintas, nº 7 Vairão Porto 4485-661 PT
+351 252660411 pbeja@cibio.up.pt 0000-0001-8164-0760
Sónia Ferreira CIBIO-InBIO, Centro de Investigação em Biodiversidade e Recursos Genéticos, Universidade do Porto Post-Doc Researcher
Campus Agrário de Vairão, Rua Padre Armando Quintas, nº 7 Vairão Porto 4485-661 PT
+351 252660411 hiporame@gmail.com 0000-0002-6884-3966
Sampling was conducted in continental Portugal from 2015 and 2019, and consisted in direct search. Specimens collected were stored in 96% ethanol. A tissue sample (leg) was removed from which DNA was extracted and the COI DNA barcode fragment was sequenced. Prior submission to GBIF, data was checked for errors and inconsistencies with OpenRefine 3.2 (http://openrefine.org/). Specimens were collected in ten localities of continental Portugal. Sampling was conducted from 2015 to 2019, in several field work expeditions. Specimens were collected in ten localities of continental Portugal. Sampling was conducted between 2015 and 2019, by direct search. Collected specimens were identified using a binocular stereoscopic microscope and stored in 96% ethanol for downstream molecular analysis. To each specimen the morphological identification was contrasted with the results of the Blast of the newly generated DNA barcodes in BOLD Identification Engine. The InBIO Barcoding Initiative Database: Portuguese Stag beetles (Coleoptera, Lucanidae) Pedro Beja 0000-0001-8164-0760 author Pedro Sousa 0000-0002-5859-9656 originator Luís P. da Silva 0000-0003-2358-1277 author Sónia Ferreira 0000-0002-6884-3966 author The InBIO Barcoding Initiative aims to develop a reference collection of DNA barcoding sequences covering Portuguese invertebrate taxa. Within the project, a special focus is afforded to insects, given their relevance to food webs, ecosystems functioning, high diversity and limited number of DNA barcoding sequences of interest. InBIO Barcoding Initiative is funded by the European Union’s Horizon 2020 Research and Innovation programme under grant agreement No 668981 and by the project PORBIOTA — Portuguese E-Infrastructure for Information and Research on Biodiversity (POCI-01-0145-FEDER-022127), supported by Operational Thematic Program for Competitiveness and Internationalization (POCI), under the PORTUGAL 2020 Partnership Agreement, through the European Regional Development Fund (FEDER). The fieldwork benefited from EDP Biodiversity Chair, the project “Promoção dos serviços de ecossistemas no Parque Natural Regional do Vale do Tua: Controlo de Pragas Agrícolas e Florestais por Morcegos” funded by the Agência de Desenvolvimento Regional do Vale do Tua, the FCT project PTDC/ASP-SIL/30250/2017 - POCI-01-0145-FEDER-030250 and includes research conducted at the Long Term Research Site of Baixo Sabor (LTER_EU_PT_002). Specimens were collected in five Portugal districts and a total of ten sites were sampled. Sampling was conducted from 2015 to 2019. Specimens in this dataset were collected in field work carried out between 2015 and 2019. Specimens were located by direct searches carried out during field work, which enabled the sampling of both live and dead specimens.
2020-01-23T10:09:17.254+00:00 dataset Ferreira S, P. da Silva L, Sousa P, Beja P (2020). The InBIO Barcoding Initiative Database: Portuguese Stag beetles (Coleoptera, Lucanidae). v1.2. CIBIO (Research Center in Biodiversity and Genetic Resources) Portugal. Occurrence dataset. https://doi.org/10.15468/7559ru https://cibio.up.pt/upload/image/logotipos/2-logo.png CIBIO (Research Center in Biodiversity and Genetic Resources) Portugal 4ec2b246-f5fa-4b90-9a8d-ddafc2a3f970 InBIO Barcoding Initiative alcohol Voucher tube 1 11 DNA extractions 1 11 f1f1225f-4247-43a3-83de-7fbd2dca7e92/v1.4.xml