Descrição
The dataset contains 63 records of Chiroptera species collected in continental Portugal and was published by Rebelo et al (2020)". Twenty-six bat species currently known for continental Portugal are represented including the first record of Myotis alcathoe for the country. Bat samples were collected under the scope of several projects spanning from 2005 to 2018. All bats were captured during mist-netting sessions or using harp-traps at roost exits. A non-lethal 3mm wing punch was collected from several individuals and stored in 96% ethanol from where DNA was extracted. The DNA barcoding of these samples was conducted within the InBIO Barcoding Initiative (IBI), funded by EnvMetaGen and PORBIOTA projects. DNA barcode sequences were deposited in BOLD (Barcode of Life Data System) online database. DNA extractions are deposited in the IBI collection at the CIBIO (Research Center in Biodiversity and Genetic Resources).
Registros de Dados
Os dados deste recurso de ocorrência foram publicados como um Darwin Core Archive (DwC-A), que é o formato padronizado para compartilhamento de dados de biodiversidade como um conjunto de uma ou mais tabelas de dados. A tabela de dados do núcleo contém 63 registros.
This IPT archives the data and thus serves as the data repository. The data and resource metadata are available for download in the downloads section. The versions table lists other versions of the resource that have been made publicly available and allows tracking changes made to the resource over time.
Versões
A tabela abaixo mostra apenas versões de recursos que são publicamente acessíveis.
Como citar
Pesquisadores deveriam citar esta obra da seguinte maneira:
Rebelo H, Ferreira S, Amorim F, Horta P, Raposeira H, Santos H, Beja P, Sousa P, Mata V (2021): The InBIO Barcoding Initiative Database: Portuguese Bats (Chiroptera). v1.4. CIBIO (Research Center in Biodiversity and Genetic Resources) Portugal. Dataset/Occurrence. http://ipt.gbif.pt/ipt/resource?r=ibi_chiroptera&v=1.4
Direitos
Pesquisadores devem respeitar a seguinte declaração de direitos:
O editor e o detentor dos direitos deste trabalho é CIBIO (Research Center in Biodiversity and Genetic Resources) Portugal. This work is licensed under a Creative Commons Attribution (CC-BY 4.0) License.
GBIF Registration
Este recurso foi registrado no GBIF e atribuído ao seguinte GBIF UUID: a4ffebe0-6711-4687-8c74-0a4da3fd84f9. CIBIO (Research Center in Biodiversity and Genetic Resources) Portugal publica este recurso, e está registrado no GBIF como um publicador de dados aprovado por GBIF Portugal.
Palavras-chave
Chiroptera; Species; Occurrence; COI; DNA barcode; Continental Portugal; Occurrence; Occurrence
Contatos
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http://orcid.org/0000-0002-7118-4068
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Cobertura Geográfica
Continental Portugal
| Coordenadas delimitadoras | Sul Oeste [37,4, -9,3], Norte Leste [41,9, -6,9] |
|---|
Cobertura Taxonômica
This dataset is composed entirely of data relating to 63 Chiroptera records. Sixty-three specimens were determined to species level. Overall, 26 species are represented in the dataset. These species belong to three families, the majority of which belong to the Vespertilionidae (21 species or 80.8%), with additional representatives from Rhinolophidae (4 species) and a single species in the Molossidae. Vespertilionidae also accounts for almost ninety percent (88.9%) of all collected samples, Rhinolophidae (9.5%) and a single sample was collected from the Molossidae family.
| Reino | Animalia |
|---|---|
| Filo | Chordata |
| Class | Mammalia |
| Ordem | Chiroptera |
| Família | Molossidae, Rhinolophidae, Vespertilionidae |
Cobertura Temporal
| Data Inicial / Data final | 2005-06-27 / 2018-08-22 |
|---|
Dados Sobre o Projeto
The InBIO Barcoding Initiative aims to develop a reference collection of DNA barcoding sequences covering Portuguese taxa. Within the project, a special focus is afforded to insects, given their relevance to food webs, ecosystems functioning, high diversity and limited number of DNA barcoding sequences of interest.
| Título | The InBIO Barcoding Initiative Database: Portuguese Bats (Chiroptera) |
|---|---|
| Identificador | InBIO Barcoding Initiative |
| Financiamento | The work was supported by the EnvMetaGen project, funded by the European Union’s Horizon 2020 research and innovation programme under grant agreement No 668981, and by the project PORBIOTA — Portuguese E-Infrastructure for Information and Research on Biodiversity (POCI-01-0145-FEDER-022127), supported by Operational Thematic Program for Competitiveness and Internationalization (POCI), under the PORTUGAL 2020 Partnership Agreement, through the European Regional Development Fund (FEDER). |
| Descrição da Área de Estudo | Samples were collected in 11 continental Portugal districts from a total of 31 different localities. These localities encompassed a great variety of habitats. Sampling was conducted from 2005 to 2018, although most specimens (76.2%) were collected in the years 2013 and 2016. |
| Descrição do Design | Specimens in this dataset were collected in field work carried out between 2005 and 2018. Specimens resulted from field work directed specifically for the sampling of Chiroptera using mist-nets or harp-traps at roost exits. |
O pessoal envolvido no projeto:
Métodos de Amostragem
Specimens resulted from field work directed specifically for the sampling of Chiroptera using mist-nets or harp-traps at roost exits.
| Área de Estudo | Samples were collected in 31 different sites of continental Portugal. Sampling was conducted from 2005 to 2018. Most specimens (76.2%) were collected in the years 2013 and 2016. |
|---|---|
| Controle de Qualidade | To each sample the morphological identification was contrasted with the results of the Blast of the newly generated DNA barcodes in BOLD Identification Engine. |
Descrição dos passos do método:
- Samples were collected from bats captured using mist-nets or harp-traps at roost exits and identified morphologically by experts. A non-lethal 3mm wing punch was collected each individual and stored in 96% ethanol from where DNA was extracted and COI DNA barcode fragment was sequenced. Prior submission to GBIF, data was checked for errors and inconsistencies with OpenRefine 3.2 (http://openrefine.org/).
Dados de Coleção
| Nome da Coleção | InBIO Barcoding Initiative |
|---|---|
| Identificador da Coleção | 4ec2b246-f5fa-4b90-9a8d-ddafc2a3f970 |
| Unidades de Curadoria | Entre 1 e 63 DNA extractions |
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Citações bibliográficas
- Rebelo, H., Ferreira, S., Amorim, F., Horta, P., Raposeira, H., Santos, H., Beja, P. & Mata, V.A. (2020). Hidden in our pockets: building of a DNA barcode library unveils the first record of Myotis alcathoe for Portugal. Biodiversity Data Journal, 8: e54479. https://doi.org/10.3897/BDJ.8.e54479 https://doi.org/10.3897/BDJ.8.e54479
Metadados Adicionais
| Propósito | The InBIO Barcoding Initiative (IBI) aims to develop a reference collection of DNA barcoding sequences primarily covering Portuguese invertebrate taxa providing a tool in ecological studies. |
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| Identificadores alternativos | a4ffebe0-6711-4687-8c74-0a4da3fd84f9 |
| http://ipt.gbif.pt/ipt/resource?r=ibi_chiroptera |