OCCURRENCE

The InBIO Barcoding Initiative Database: Portuguese Mantises (Mantodea)

Latest version published by CIBIO (Research Center in Biodiversity and Genetic Resources) Portugal on 13 September 2021 CIBIO (Research Center in Biodiversity and Genetic Resources) Portugal
The dataset contains 144 records of Mantis (Mantodea) species collected from 2006 to 2019 in continental Portugal. All captured specimens were identified to species level, belonging to nine of the twelve species of Mantodea present in Portugal. Specimens were detected and captured by direct search of the environment and by using both UV and mercury-vapor lamps to attract the insects. Captured specimens were preserved in 96% ethanol. From each specimen one leg (tissue sample) was removed to be used for DNA extraction. Samples of each species were selected for DNA sequencing based on their geographic provenance. Sequencing of the 658 bp COI DNA barcode was conducted within the InBIO Barcoding Initiative (IBI) and all DNA sequences were submitted to BOLD (Barcode of Life Data System) database... More

Description

The dataset contains 144 records of Mantis (Mantodea) species collected from 2006 to 2019 in continental Portugal. All captured specimens were identified to species level, belonging to nine of the twelve species of Mantodea present in Portugal. Specimens were detected and captured by direct search of the environment and by using both UV and mercury-vapor lamps to attract the insects. Captured specimens were preserved in 96% ethanol. From each specimen one leg (tissue sample) was removed to be used for DNA extraction. Samples of each species were selected for DNA sequencing based on their geographic provenance. Sequencing of the 658 bp COI DNA barcode was conducted within the InBIO Barcoding Initiative (IBI) and all DNA sequences were submitted to BOLD (Barcode of Life Data System) database. All specimens and DNA extracts are deposited in the IBI collection at the CIBIO (Research Center in Biodiversity and Genetic Resources).

Data Records

The data in this occurrence resource has been published as a Darwin Core Archive (DwC-A), which is a standardized format for sharing biodiversity data as a set of one or more data tables. The core data table contains 144 records.

This IPT archives the data and thus serves as the data repository. The data and resource metadata are available for download in the downloads section. The versions table lists other versions of the resource that have been made publicly available and allows tracking changes made to the resource over time.

Downloads

Download the latest version of this resource data as a Darwin Core Archive (DwC-A) or the resource metadata as EML or RTF:

Data as a DwC-A file download 144 records in English (17 kB) - Update frequency: as needed
Metadata as an EML file download in English (28 kB)
Metadata as an RTF file download in English (18 kB)

Versions

The table below shows only published versions of the resource that are publicly accessible.

How to cite

Researchers should cite this work as follows:

Ferreira S, Oliveira D, Corley M, da Silva L P, Sousa P, Beja P (2021). The InBIO Barcoding Initiative Database: Portuguese Mantises (Mantodea). v1.2. CIBIO (Research Center in Biodiversity and Genetic Resources) Portugal. Dataset/Occurrence. https://doi.org/10.15468/ux2yhn

Rights

Researchers should respect the following rights statement:

The publisher and rights holder of this work is CIBIO (Research Center in Biodiversity and Genetic Resources) Portugal. This work is licensed under a Creative Commons Attribution (CC-BY) 4.0 License.

GBIF Registration

This resource has been registered with GBIF, and assigned the following GBIF UUID: 7ead7d79-2a5b-489f-80db-d4826a725edd.  CIBIO (Research Center in Biodiversity and Genetic Resources) Portugal publishes this resource, and is itself registered in GBIF as a data publisher endorsed by GBIF Portugal.

Keywords

Occurrence; Mantodea; Mantis; Species; Cytochrome c oxidase I (COI); DNA barcode; Continental Portugal; Specimen

Contacts

Who created the resource:

Sónia Ferreira
Post-Doc Researcher
CIBIO-InBIO, Centro de Investigação em Biodiversidade e Recursos Genéticos, Universidade do Porto
Campus Agrário de Vairão, Rua Padre Armando Quintas, nº 7
4485-661 Vairão
Porto
PT
+351 252660411
Daniel Oliveira
Researcher
CIBIO-InBIO, Centro de Investigação em Biodiversidade e Recursos Genéticos, Universidade do Porto
Campus Agrário de Vairão, Rua Padre Armando Quintas, nº 7
4485-661 Vairão
Porto
PT
Martin Corley
Researcher
Pucketty Farm Cottage
SN7 8JP Faringdon
Oxfordshire
GB
Luís P. da Silva
Post-Doc Researcher
CIBIO-InBIO, Centro de Investigação em Biodiversidade e Recursos Genéticos, Universidade do Porto
Campus Agrário de Vairão, Rua Padre Armando Quintas, nº 7
4485-661 Vairão
Porto
PT
+351 252660411
Pedro Sousa
Post-Doc Researcher
CIBIO-InBIO, Centro de Investigação em Biodiversidade e Recursos Genéticos, Universidade do Porto
Campus Agrário de Vairão, Rua Padre Armando Quintas, nº 7
4485-661 Vairão
Porto
PT
+351 252660411
Pedro Beja
Coordinating Researcher
CIBIO-InBIO, Centro de Investigação em Biodiversidade e Recursos Genéticos, Universidade do Porto
Campus Agrário de Vairão, Rua Padre Armando Quintas, nº 7
4485-661 Vairão
Porto
PT
+351 252660411

Who can answer questions about the resource:

Pedro Beja
Coordinating Researcher
CIBIO-InBIO, Centro de Investigação em Biodiversidade e Recursos Genéticos, Universidade do Porto
Campus Agrário de Vairão, Rua Padre Armando Quintas, nº 7
4485-661 Vairão
Porto
PT
+351 252660411
Sónia Ferreira
Post-Doc Researcher
CIBIO-InBIO, Centro de Investigação em Biodiversidade e Recursos Genéticos, Universidade do Porto
Campus Agrário de Vairão, Rua Padre Armando Quintas, nº 7
4485-661 Vairão
Porto
PT
+351 252660411

Who filled in the metadata:

Sónia Ferreira
Post-Doc Researcher
CIBIO-InBIO, Centro de Investigação em Biodiversidade e Recursos Genéticos, Universidade do Porto
Campus Agrário de Vairão, Rua Padre Armando Quintas, nº 7
4485-661 Vairão
Porto
PT
+351 252660411
Daniel Oliveira
Researcher
CIBIO-InBIO, Centro de Investigação em Biodiversidade e Recursos Genéticos, Universidade do Porto
Campus Agrário de Vairão, Rua Padre Armando Quintas, nº 7
4485-661 Vairão
Porto
PT
Martin Corley
Researcher
Pucketty Farm Cottage
SN7 8JP Faringdon
Oxfordshire
GB
Luís P. da Silva
Post-Doc Researcher
CIBIO-InBIO, Centro de Investigação em Biodiversidade e Recursos Genéticos, Universidade do Porto
Campus Agrário de Vairão, Rua Padre Armando Quintas, nº 7
4485-661 Vairão
Porto
PT
+351 252660411
Pedro Sousa
Post-Doc Researcher
CIBIO-InBIO, Centro de Investigação em Biodiversidade e Recursos Genéticos, Universidade do Porto
Campus Agrário de Vairão, Rua Padre Armando Quintas, nº 7
4485-661 Vairão
Porto
PT
+351 252660411
Pedro Beja
Coordinating Researcher
CIBIO-InBIO, Centro de Investigação em Biodiversidade e Recursos Genéticos, Universidade do Porto
Campus Agrário de Vairão, Rua Padre Armando Quintas, nº 7
4485-661 Vairão
Porto
PT
+351 252660411

Geographic Coverage

Continental Portugal.

Bounding Coordinates South West [37.03, -8.99], North East [41.91, -6.56]

Taxonomic Coverage

This dataset is composed of data relating to 144 Mantodea specimens belonging to nine of the twelve species present in Portugal. These represent four families and eight genera of Mantodea present in the country. The two non-native species of the Miomantis genus and the rare Rivetina baetica were not captured and therefore are not included in the dataset. The most represented species are Ameles paradecolor Agabiti, Salvatrice & Lombardo, 2010 (39 specimens) and Perlamantis allibertii Guérin-Méneville, 1843 (36 specimens), accounting for 52% of the collected specimens.

Kingdom  Animalia
Phylum  Arthropoda
Class  Insecta
Order  Mantodea
Family  Amorphoscelidae,  Empusidae,  Mantidae,  Tarachodidae

Temporal Coverage

Start Date / End Date 2006-07-20 / 2019-05-26

Project Data

The InBIO Barcoding Initiative aims to develop a reference collection of DNA barcoding sequences covering Portuguese invertebrate taxa. Within the project, a special focus is afforded to insects, given their relevance to food webs, ecosystems functioning, high diversity and limited number of DNA barcoding sequences of interest.

Title The InBIO Barcoding Initiative Database: Portuguese Mantises (Mantodea)
Identifier InBIO Barcoding Initiative
Funding InBIO Barcoding Initiative is funded by the European Union’s Horizon 2020 Research and Innovation programme under grant agreement No 668981 and by the project PORBIOTA — Portuguese E-Infrastructure for Information and Research on Biodiversity (POCI-01-0145-FEDER-022127), supported by Operational Thematic Program for Competitiveness and Internationalization (POCI), under the PORTUGAL 2020 Partnership Agreement, through the European Regional Development Fund (FEDER). The fieldwork benefited from EDP Biodiversity Chair, the project “Promoção dos serviços de ecossistemas no Parque Natural Regional do Vale do Tua: Controlo de Pragas Agrícolas e Florestais por Morcegos” funded by the Agência de Desenvolvimento Regional do Vale do Tua, and includes research conducted at the Long Term Research Site of Baixo Sabor (LTER_EU_PT_002).
Study Area Description Specimens were captured during several field incursions from 2006 to 2019 in 60 localities, distributed across eight districts throughout continental Portugal.
Design Description The specimens in this dataset were collected in field work incursions carried out between 2006 and 2019, encompassing several sites throughout continental Portugal. Specimens of Mantodea were detected by direct search of the environment and by using UV LED and mercury-vapor lamps as lures.

The personnel involved in the project:

Sampling Methods

Specimens of Mantodea were captured in continental Portugal from 2006 to 2019 by direct search of the environment and by using both UV LED and mercury-vapor lamps to attract the insects. Captured specimens were preserved in 96% ethanol and stored at the InBIO Barcoding Initiative reference collection for downstream molecular analysis. Collected specimens were morphologically identified.

Study Extent Specimens of Mantodea were captured in 60 sites. Sites were distributed across continental Portugal, with a concentration of records in the NE region of the country. Sampling was conducted from 2006 to 2019, in several field work expeditions.
Quality Control For all DNA barcoded specimens, their morphological identification was contrasted with the results of the Blast of the newly generated DNA barcodes in BOLD Identification Engine. Prior submission to GBIF, data was checked for errors and inconsistencies with OpenRefine 3.4.

Method step description:

  1. Specimens of Mantodea were captured in 60 different localities of continental Portugal. Field work was carried out between 2006 and 2019, with 78% of the records obtained in 2018.
  2. Specimens were collected by direct search of the sampling site while also using both UV LED and mercury-vapor lamps as lures distributed along the site. Collected specimens were preserved in 96% ethanol.
  3. The specimens were morphologically identified using a binocular stereoscopic microscope and resorting to available literature (Agabiti, Salvatrice and Lombardo, 2010; Marabuto, 2014; Sánchez-Vialas, Rodríguez-Flores and García-París, 2015).
  4. DNA barcodes were sequenced from a subset of samples from each species in the dataset, usually six, selected to represent the best geographical coverage available for the species, for a total of 48 samples. For this, one leg was removed from each individual, DNA was then extracted, and a 658 bp COI DNA barcode fragment was amplified and sequenced.
  5. All obtained sequences were submitted to BOLD database and to each sequenced specimen the morphological identification was contrasted with the results of the BLAST of the newly generated DNA barcodes in BOLD Identification Engine.
  6. Prior submission to GBIF, data was checked for errors and inconsistencies with OpenRefine 3.4.

Collection Data

Collection Name InBIO Barcoding Initiative
Collection Identifier 4ec2b246-f5fa-4b90-9a8d-ddafc2a3f970
Parent Collection Identifier CIBIO (Research Center in Biodiversity and Genetic Resources) Portugal
Specimen preservation methods Alcohol
Curatorial Units Between 1 and 144 Voucher tube ,  Between 1 and 48 DNA extractions

Bibliographic Citations

  1. Agabiti, B., Salvatrice, I. & Lombardo, F. (2010) . The Mediterranean Species of the Genus Ameles Burmeister,1838 (Insecta, Mantodea: Amelinae), with a Biogeographic and Phylogenetic Evaluation. Boletín de la Sociedad Entomológica Aragonesa, 47, pp. 1–20.
  2. Marabuto, E. (2014). The Afrotropical Miomantis caffra Saussure 1871 and M. paykullii Stal 1871: first records of alien mantid species in Portugal and Europe, with an updated checklist of Mantodea in Portugal (Insecta: Mantodea). Biodiversity Data Journal, 2, p. e4117. https://doi.org/10.3897/bdj.2.e4117
  3. Sánchez-Vialas, A., Rodríguez-Flores, P.C. & García-París, M. (2015). Confirmation of reproductive success of Rivetina baetica (Rambur, 1838) (Mantodea), a thermophilous species, in continental areas of Central Spain. Graellsia, 71(2), p. e035. http://dx.doi.org/10.3989/graellsia.2015.v71.145

Additional Metadata

Purpose The InBIO Barcoding Initiative (IBI) aims to develop a reference collection of DNA barcoding sequences primarily covering Portuguese invertebrate taxa providing a tool in ecological studies.
Alternative Identifiers 7ead7d79-2a5b-489f-80db-d4826a725edd
http://ipt.gbif.pt/ipt/resource?r=ibi_mantodea_01