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The InBIO Barcoding Initiative Database: Gluvia dorsalis (Latreille, 1817) (Solifugae)

Latest version published by CIBIO (Research Center in Biodiversity and Genetic Resources) Portugal on Aug 4, 2020 CIBIO (Research Center in Biodiversity and Genetic Resources) Portugal

The dataset contains six records of Solifugae specimens collected from 2016 to 2018 in continental Portugal. All specimens were identified as Gluvia dorsalis (Latreille, 1817) that belongs to the Daesiidae family, and is the only Solifugae species known to occur in Portugal. Specimens were captured during fieldwork directed specifically for the sampling of Solifugae and stored in 96% ethanol. A tissue sample (a leg), was collected from each individual, from which DNA was extracted. The DNA barcoding of these specimens was conducted within the InBIO Barcoding Initiative (IBI), funded by EnvMetaGen and PORBIOTA projects. DNA barcode sequences were deposited in BOLD (Barcode of Life Data System) online database. Preserved specimens and DNA extracts are deposited in the IBI collection at the CIBIO (Research Center in Biodiversity and Genetic Resources).

Data Records

The data in this occurrence resource has been published as a Darwin Core Archive (DwC-A), which is a standardized format for sharing biodiversity data as a set of one or more data tables. The core data table contains 6 records.

This IPT archives the data and thus serves as the data repository. The data and resource metadata are available for download in the downloads section. The versions table lists other versions of the resource that have been made publicly available and allows tracking changes made to the resource over time.

Downloads

Download the latest version of this resource data as a Darwin Core Archive (DwC-A) or the resource metadata as EML or RTF:

Data as a DwC-A file download 6 records in English (6 KB) - Update frequency: as needed
Metadata as an EML file download in English (18 KB)
Metadata as an RTF file download in English (11 KB)

Versions

The table below shows only published versions of the resource that are publicly accessible.

How to cite

Researchers should cite this work as follows:

Ferreira S, Sousa P, Beja P (2020): The InBIO Barcoding Initiative Database: Gluvia dorsalis (Latreille, 1817) (Solifugae). v1. CIBIO (Research Center in Biodiversity and Genetic Resources) Portugal. Occurrence dataset. https://doi.org/10.15468/mawwgx

Rights

Researchers should respect the following rights statement:

The publisher and rights holder of this work is CIBIO (Research Center in Biodiversity and Genetic Resources) Portugal. This work is licensed under a Creative Commons Attribution (CC-BY) 4.0 License.

GBIF Registration

This resource has been registered with GBIF, and assigned the following GBIF UUID: b76dc074-73ef-474b-be90-d40a67bde9ba.  CIBIO (Research Center in Biodiversity and Genetic Resources) Portugal publishes this resource, and is itself registered in GBIF as a data publisher endorsed by GBIF Portugal.

Keywords

Solifugae; Occurrence records; Species; Continental Portugal; DNA barcode; Cytochrome c oxidase I (COI); Occurrence; Specimen

Contacts

Who created the resource:

Sónia Ferreira
Post-Doc Researcher
CIBIO-InBIO, Centro de Investigação em Biodiversidade e Recursos Genéticos, Universidade do Porto Campus Agrário de Vairão, Rua Padre Armando Quintas, nº 7 4485-661 Vairão Porto PT +351 252660411
Pedro Sousa
Post-Doc Researcher
CIBIO-InBIO, Centro de Investigação em Biodiversidade e Recursos Genéticos, Universidade do Porto Campus Agrário de Vairão, Rua Padre Armando Quintas, nº 7 4485-661 Vairão Porto PT +351 252660411
Pedro Beja
Coordinating Researcher
CIBIO-InBIO, Centro de Investigação em Biodiversidade e Recursos Genéticos, Universidade do Porto Campus Agrário de Vairão, Rua Padre Armando Quintas, nº 7 4485-661 Vairão Porto PT +351 252660411

Who can answer questions about the resource:

Pedro Beja
Coordinating Researcher
CIBIO-InBIO, Centro de Investigação em Biodiversidade e Recursos Genéticos, Universidade do Porto Campus Agrário de Vairão, R. Padre Armando Quintas, 7 4485-661 Vairão Porto PT +351 252660411
Sónia Ferreira
Post-Doc Researcher
CIBIO-InBIO, Centro de Investigação em Biodiversidade e Recursos Genéticos, Universidade do Porto Campus Agrário de Vairão, Rua Padre Armando Quintas, nº 7 4485-661 Vairão Porto PT +351 252660411

Who filled in the metadata:

Sónia Ferreira
Post-Doc Researcher
CIBIO-InBIO, Centro de Investigação em Biodiversidade e Recursos Genéticos, Universidade do Porto Campus Agrário de Vairão, Rua Padre Armando Quintas, nº 7 4485-661 Vairão Porto PT +351 252660411
Pedro Sousa
Post-Doc Researcher
CIBIO-InBIO, Centro de Investigação em Biodiversidade e Recursos Genéticos, Universidade do Porto Campus Agrário de Vairão, Rua Padre Armando Quintas, nº 7 4485-661 Vairão Porto PT +351 252660411
Pedro Beja
Coordinating Researcher
CIBIO-InBIO, Centro de Investigação em Biodiversidade e Recursos Genéticos, Universidade do Porto Campus Agrário de Vairão, Rua Padre Armando Quintas, nº 7 4485-661 Vairão Porto PT +351 252660411

Geographic Coverage

Continental Portugal.

Bounding Coordinates South West [37.24, -7.429], North East [41.349, -7.073]

Taxonomic Coverage

This dataset is composed of data relating to six Solifugae specimens. All specimens were determined to species level. A single species is represented in the dataset, Gluvia dorsalis (Latreille, 1817) that belongs to the Daesiidae family.

Kingdom  Animalia
Phylum  Arthropoda
Class  Arachnida
Order  Solifugae
Family  Daesiidae

Temporal Coverage

Start Date / End Date 2016-05-14 / 2018-07-09

Project Data

The InBIO Barcoding Initiative aims to develop a reference collection of DNA barcoding sequences covering Portuguese invertebrate taxa. Within the project, a special focus is afforded to insects, given their relevance to food webs, ecosystems functioning, high diversity and limited number of DNA barcoding sequences of interest.

Title The InBIO Barcoding Initiative Database: Gluvia dorsalis (Latreille, 1817) (Solifugae)
Identifier InBIO Barcoding Initiative
Funding The work was supported by the EnvMetaGen project, funded by the European Union’s Horizon 2020 research and innovation programme under grant agreement No 668981, by the project PORBIOTA — Portuguese E-Infrastructure for Information and Research on Biodiversity (POCI-01-0145-FEDER-022127), supported by Operational Thematic Program for Competitiveness and Internationalization (POCI), under the PORTUGAL 2020 Partnership Agreement, through the European Regional Development Fund (FEDER) and by EDP Biodiversity Chair, and is part of research conducted at the Long Term Research Site of Baixo Sabor (LTER_EU_PT_002).
Study Area Description Samples were collected in three different localities. All specimens were collected in Mediterranean-type habitats, including scrublands. Sampling was conducted from 2016 to 2018.
Design Description Specimens in this dataset were collected in field work carried out between 2016 and 2018. Specimens resulted from field work directed specifically for the sampling of Solifugae.

The personnel involved in the project:

Sampling Methods

Specimens were collected during direct searches for active animals, which, when found, were hand collected.

Study Extent Specimens were collected in 3 different localities of continental Portugal. Sampling was conducted from 2016 to 2018, in four field work expeditions.
Quality Control To each specimen the morphological identification was contrasted with the results of the Blast of the newly generated DNA barcodes in BOLD Identification Engine.

Method step description:

  1. Specimens were collected in 3 different localities of continental Portugal. Sampling was conducted from 2016 to 2018, and consisted of direct search of specimens. Specimens collected were stored in 96% ethanol. A tissue sample was removed from which DNA was extracted and a COI DNA barcode fragment was sequenced. Prior submission to GBIF, data was checked for errors and inconsistencies with OpenRefine 3.2 (http://openrefine.org/). Data generated were submitted to BOLD, GenBank and GBIF.

Collection Data

Collection Name InBIO Barcoding Initiative
Collection Identifier 4ec2b246-f5fa-4b90-9a8d-ddafc2a3f970
Specimen preservation methods Alcohol
Curatorial Units Between 1 and 6 Voucher tube ,  Between 1 and 6 DNA extractions

Additional Metadata

Purpose The InBIO Barcoding Initiative (IBI) aims to develop a reference collection of DNA barcoding sequences primarily covering Portuguese invertebrate taxa providing a tool in ecological studies.
Alternative Identifiers b76dc074-73ef-474b-be90-d40a67bde9ba
http://ipt.gbif.pt/ipt/resource?r=ibi_solifugae