Occurrence

The InBIO Barcoding Initiative Database: Diptera 03 - Further records on Portuguese Limoniidae, Pediciidae and Tipulidae

Latest version published by CIBIO (Research Center in Biodiversity and Genetic Resources) Portugal on 27 September 2021 CIBIO (Research Center in Biodiversity and Genetic Resources) Portugal

Download the latest version of this resource data as a Darwin Core Archive (DwC-A) or the resource metadata as EML or RTF:

Data as a DwC-A file download 219 records in English (24 KB) - Update frequency: as needed
Metadata as an EML file download in English (34 KB)
Metadata as an RTF file download in English (20 KB)

Description

The dataset contains 219 entries with 241 records of specimens from the families Limoniidae, Pediciidae and Tipulidae, collected between 1985 to 2019 in continental Portugal (Oosterbroek et al., 2020, part). All specimens have been identified to species level, in a total of 65 species representing 45% of the craneflies known for continental Portugal. Specimens were collected in 67 different localities. The dataset “Diptera 03 - Further records on Portuguese Limoniidae, Pediciidae and Tipulidae” is part of a group of DNA barcoding datasets of Diptera conducted within the InBIO Barcoding Initiative (IBI), two of which have already been made available through GBIF (“The InBIO Barcoding Initiative Database: Diptera 01”, https://doi.org/10.15468/q1bvt3; “The InBIO Barcoding Initiative Database: DNA barcodes of Portuguese Diptera 02 - Limoniidae, Pediciidae and Tipulidae”, https://doi.org/10.15468/f6256w). IBI is funded by the EnvMetaGen and PORBIOTA projects. Most specimens (142) are deposited in the IBI collection. Other specimens are deposited in the Collection Rui Andrade (Porto, Portugal, 76 specimens), the Hunterian Zoology Museum (Glasgow, U.K., 22 specimens) and in the Naturalis Biodiversity Center, Zoology collections (Leiden, Netherlands, 1 specimen).

Data Records

The data in this occurrence resource has been published as a Darwin Core Archive (DwC-A), which is a standardized format for sharing biodiversity data as a set of one or more data tables. The core data table contains 219 records.

This IPT archives the data and thus serves as the data repository. The data and resource metadata are available for download in the downloads section. The versions table lists other versions of the resource that have been made publicly available and allows tracking changes made to the resource over time.

Versions

The table below shows only published versions of the resource that are publicly accessible.

How to cite

Researchers should cite this work as follows:

Ferreira S, Oosterbroek P, Starý J, Andrade R, Hancock E G, Mata V A, da Silva L P, Lopes P B, Corley M, Sousa P, Beja P (2021): The InBIO Barcoding Initiative Database: Diptera 03 - Further records on Portuguese Limoniidae, Pediciidae and Tipulidae. v1. CIBIO (Research Center in Biodiversity and Genetic Resources) Portugal. Dataset/Occurrence. http://ipt.gbif.pt/ipt/resource?r=ibi_diptera_3&v=1.0

Rights

Researchers should respect the following rights statement:

The publisher and rights holder of this work is CIBIO (Research Center in Biodiversity and Genetic Resources) Portugal. This work is licensed under a Creative Commons Attribution (CC-BY 4.0) License.

GBIF Registration

This resource has been registered with GBIF, and assigned the following GBIF UUID: ca96a661-f979-4e4a-9b96-5ac511601384.  CIBIO (Research Center in Biodiversity and Genetic Resources) Portugal publishes this resource, and is itself registered in GBIF as a data publisher endorsed by GBIF Portugal.

Keywords

Diptera; Craneflies; Limoniidae; Pediciidae; Tipulidae; Occurrence records; Species distributions; Continental Portugal; Occurrence

Contacts

Sónia Ferreira
  • Metadata Provider
  • Originator
  • Point Of Contact
Post-Doc Researcher
CIBIO-InBIO, Centro de Investigação em Biodiversidade e Recursos Genéticos, Universidade do Porto
Campus Agrário de Vairão, Rua Padre Armando Quintas, nº 7
4485-661 Vairão
Porto
PT
+351 252660411
Pjotr Oosterbroek
  • Metadata Provider
  • Originator
Associate staffmember
Naturalis Biodiversity Center
Naturalis Biodiversity Center, Darwinweg 2
2333 CR Leiden
South Holland
NL
Jaroslav Starý
  • Metadata Provider
  • Originator
Researcher
Silesian Museum
Nádražní okruh 31
746 01 Opava
CZ
Rui Andrade
  • Metadata Provider
  • Originator
Researcher
Rua Calouste Gulbenkian 237 4H3
4050-145 Porto
Porto
PT
E. Geoffrey Hancock
  • Metadata Provider
  • Originator
Curator of Entomology
The Hunterian Museum, University of Glasgow
The Hunterian (Zoology Museum), Graham Kerr Building, University of Glasgow
G12 8QQ Glasgow
GB
Vanessa Alves Mata
  • Metadata Provider
  • Originator
Post-Doc Researcher
CIBIO-InBIO, Centro de Investigação em Biodiversidade e Recursos Genéticos, Universidade do Porto
Campus Agrário de Vairão, Rua Padre Armando Quintas, nº 7
4485-661 Vairão
Porto
PT
+351 252660411
Luís P. da Silva
  • Metadata Provider
  • Originator
Post-Doc Researcher
CIBIO-InBIO, Centro de Investigação em Biodiversidade e Recursos Genéticos, Universidade do Porto
Campus Agrário de Vairão, Rua Padre Armando Quintas, nº 7
4485-661 Vairão
Porto
PT
+351 252660411
Pedro Brito Lopes
  • Metadata Provider
  • Originator
Researcher
CIBIO-InBIO, Centro de Investigação em Biodiversidade e Recursos Genéticos, Universidade do Porto
Campus Agrário de Vairão, Rua Padre Armando Quintas, nº 7
4485-661 Vairão
Porto
PT
+351 252660411
Martin Corley
  • Metadata Provider
  • Originator
Researcher
Pucketty Farm Cottage
SN7 8JP Faringdon
Oxfordshire
GB
Pedro Sousa
  • Metadata Provider
  • Originator
Post-Doc Researcher
CIBIO-InBIO, Centro de Investigação em Biodiversidade e Recursos Genéticos, Universidade do Porto
Campus Agrário de Vairão, Rua Padre Armando Quintas, nº 7
4485-661 Vairão
Porto
PT
+351 252660411
Pedro Beja
  • Metadata Provider
  • Originator
  • Point Of Contact
Coordinating Researcher
CIBIO-InBIO, Centro de Investigação em Biodiversidade e Recursos Genéticos, Universidade do Porto
Campus Agrário de Vairão, Rua Padre Armando Quintas, nº 7
4485-661 Vairão
Porto
PT
+351 252660411

Geographic Coverage

Continental Portugal.

Bounding Coordinates South West [37.1, -9.4], North East [42, -6.2]

Taxonomic Coverage

This dataset is composed of data relating to 241 Diptera specimens. All specimens were determined to species level. Overall, 65 species are represented in the dataset. One species has been further identified to subspecies level, Nephrotoma appendiculata pertenua Oosterbroek, 1978. These species belong to 24 genera unevenly distributed among three Cranefly families, Limoniidae (21 genera), Tipulidae (2 genera) and Pediciidae (1 genus). The family Tipulidae accounts for a higher number of collected specimens when compared with the Limoniidae, 139 and 101, respectively. However, Tipulidae is represented by a smaller number of recorded species, 30, when compared to the 34 species recorded for the Limoniidae.

Kingdom Animalia
Phylum Arthropoda
Class Insecta
Order Diptera
Family Limoniidae, Pediciidae, Tipulidae

Temporal Coverage

Start Date / End Date 1985-03-21 / 2019-10-29

Project Data

The InBIO Barcoding Initiative aims to develop a reference collection of DNA barcoding sequences covering Portuguese invertebrate taxa. Within the project, a special focus is afforded to insects, given their relevance to food webs, ecosystems functioning, high diversity and limited number of DNA barcoding sequences of interest.

Title The InBIO Barcoding Initiative Database: Diptera 03 - Further records on Portuguese Limoniidae, Pediciidae and Tipulidae
Identifier InBIO Barcoding Initiative
Funding The InBIO Barcoding Initiative was funded by the European Union’s Horizon 2020 Research and Innovation Programme under grant agreement No 668981 and by the project PORBIOTA - Portuguese E-Infrastructure for Information and Research on Biodiversity (POCI-01-0145-FEDER-022127), supported by Operational Thematic Program for Competitiveness and Internationalization (POCI), under the PORTUGAL 2020 Partnership Agreement, through the European Regional Development Fund (FEDER). The fieldwork benefited from EDP Biodiversity Chair, the project “Promoção dos serviços de ecossistemas no Parque Natural Regional do Vale do Tua: Controlo de Pragas Agrícolas e Florestais por Morcegos” funded by the Agência de Desenvolvimento Regional do Vale do Tua, and includes research conducted at the Long Term Research Site of Baixo Sabor (LTER_EU_PT_002). LPdS and SF were supported by individual research contracts (CEECIND/02064/2017, 2020.03526.CEECIND) funded by FCT. JS was funded by the Ministry of Culture of the Czech Republic through institutional financing of long-term conceptual development of the Silesian Museum research institution (MK000100595).
Study Area Description Specimens were collected in 15 of the 18 Administrative Districts of Continental Portugal, in 67 different localities.
Design Description Specimens in this dataset were collected in field work carried out between 1985 and 2019. Most specimens were collected in the years 2018 (59%) and 2019 (32%). Sampling was directed specifically for the sampling of Diptera using different methodologies. All specimens were morphologically identified.

The personnel involved in the project:

Pjotr Oosterbroek
  • Author
Jaroslav Starý
  • Author
Rui Andrade
  • Author
E. Geoffrey Hancock
  • Author
Vanessa Alves Mata

Sampling Methods

The studied material was collected in 67 different localities from continental Portugal. Sampling was conducted between 1985 and 2019, although 91% of the records were made in the years 2018 and 2019. Specimens were collected by direct search and individual netting of specimens, by sweeping the vegetation with a net or were directly collected at light traps, using both UV and mercury vapor lights. Captured specimens deposited in the IBI reference collection were preserved in 96% alcohol. Some specimens previously preserved in alcohol were dry-pinned and labelled after identification.

Study Extent Continental Portugal.
Quality Control Data was checked for errors and inconsistencies with OpenRefine 3.4 (http://openrefine.org/) before submission to GBIF.

Method step description:

  1. Specimens were collected in 67 different localities of continental Portugal. Field work was carried out between 1985 and 2019, although 91% of the records were made in the years 2018 and 2019.
  2. Specimens were collected during fieldwork by direct search and individual netting of specimens, by sweeping the vegetation or were directly collected at light traps (using both UV and mercury vapor lights). Specimens deposited in the IBI reference collection at CIBIO (Research Center in Biodiversity and Genetic Resources) were preserved in 96% alcohol.
  3. All specimens were morphologically identified using the available literature. Identification sometimes required a closer examination of the terminalia, which were prepared by boiling in a solution of 10% KOH.
  4. Prior submission to GBIF, data was checked for errors and inconsistencies with OpenRefine 3.4 (http://openrefine.org/).

Collection Data

Collection Name InBIO Barcoding Initiative
Collection Identifier 4ec2b246-f5fa-4b90-9a8d-ddafc2a3f970
Specimen preservation methods Alcohol,  Dried,  Pinned
Curatorial Units Between 1 and 219 Voucher tube ,  Between 1 and 68 DNA extractions

Bibliographic Citations

  1. Oosterbroek, P., Starý, J., Andrade, R., Hancock, E.G. & Ferreira, S. 2020. The Craneflies of continental Portugal (Diptera, Limoniidae, Pediciidae, Tipulidae) including 28 species new for Portugal. Boletín de la Asociación española de Entomología 44 (3-4): 317‑358. URL: http://www.entomologica.es/publicaciones-boletin/art1834

Additional Metadata

Purpose The InBIO Barcoding Initiative (IBI) aims to develop a reference collection of DNA barcoding sequences primarily covering Portuguese invertebrate taxa providing a tool in ecological studies.
Alternative Identifiers http://ipt.gbif.pt/ipt/resource?r=ibi_diptera_3