Registros biológicos

The InBIO Barcoding Initiative Database: A taxonomic revision of the Western Palaearctic genus Cacochroa Heinemann, 1870 (Lepidoptera, Depressariidae)

Última versión Publicado por CIBIO (Research Center in Biodiversity and Genetic Resources) Portugal en 5 de enero de 2021 CIBIO (Research Center in Biodiversity and Genetic Resources) Portugal

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Descripción

The dataset contains 11 records of moth specimens (Lepidoptera, Depressariidae) collected from 1988 to 2016 in seven South European and North African countries. The study of these specimens resulted in the description of a new genus, Rosetea Corley & Ferreira, 2019. The new genus contains two species previously placed in the genus Cacochroa Heinemann, 1870, Rosetea corfuella (Lvovsky, 2000) and R. rosetella (Corley, 2018), but also a new species, R. sara Corley & Ferreira, 2019, described based on differences found in the male and female genitalia and on DNA barcodes in Corley et al. (2019). Captured specimens were identified to species level and preserved in 96% ethanol, with one exception kept in dry storage. A tissue sample, one leg, was collected from each individual, from which DNA was extracted. The DNA barcoding of these specimens was conducted within the InBIO Barcoding Initiative (IBI), funded by EnvMetaGen and PORBIOTA projects. DNA barcode sequences were deposited in BOLD (Barcode of Life Data System) online database. DNA extracts are deposited in the IBI collection at the CIBIO (Research Center in Biodiversity and Genetic Resources).

Registros

Los datos en este recurso de registros biológicos han sido publicados como Archivo Darwin Core(DwC-A), el cual es un formato estándar para compartir datos de biodiversidad como un conjunto de una o más tablas de datos. La tabla de datos del core contiene 11 registros.

Este IPT archiva los datos y, por lo tanto, sirve como repositorio de datos. Los datos y los metadatos del recurso están disponibles para su descarga en la sección descargas. La tabla versiones enumera otras versiones del recurso que se han puesto a disposición del público y permite seguir los cambios realizados en el recurso a lo largo del tiempo.

Versiones

La siguiente tabla muestra sólo las versiones publicadas del recurso que son de acceso público.

¿Cómo referenciar?

Los usuarios deben citar este trabajo de la siguiente manera:

Corley M, Ferreira S, Sousa P, Beja P (2020): The InBIO Barcoding Initiative Database: A taxonomic revision of the Western Palaearctic genus Cacochroa Heinemann, 1870 (Lepidoptera, Depressariidae). v1.0. CIBIO (Research Center in Biodiversity and Genetic Resources) Portugal. Dataset/Occurrence. https://doi.org/10.15468/g5hudd

Derechos

Los usuarios deben respetar los siguientes derechos de uso:

El publicador y propietario de los derechos de este trabajo es CIBIO (Research Center in Biodiversity and Genetic Resources) Portugal. Esta obra está bajo una licencia Creative Commons de Atribución/Reconocimiento (CC-BY 4.0).

Registro GBIF

Este recurso ha sido registrado en GBIF con el siguiente UUID: 900a387b-cf8b-479b-b983-69fa973f3bcd.  CIBIO (Research Center in Biodiversity and Genetic Resources) Portugal publica este recurso y está registrado en GBIF como un publicador de datos avalado por GBIF Portugal.

Palabras clave

Lepidoptera; Species; Occurrence; Cytochrome c oxidase I (COI); DNA barcode; Europe; Africa; Occurrence

Contactos

Martin Corley
  • Proveedor De Los Metadatos
  • Originador
Researcher
Pucketty Farm Cottage
SN7 8JP Faringdon
Oxfordshire
GB
Sónia Ferreira
  • Proveedor De Los Metadatos
  • Originador
  • Punto De Contacto
Post-Doc Researcher
CIBIO-InBIO, Centro de Investigação em Biodiversidade e Recursos Genéticos, Universidade do Porto
Campus Agrário de Vairão, Rua Padre Armando Quintas, nº 7
4485-661 Vairão
Porto
PT
+351 252660411
Pedro Sousa
  • Proveedor De Los Metadatos
Post-Doc Researcher
CIBIO-InBIO, Centro de Investigação em Biodiversidade e Recursos Genéticos, Universidade do Porto
Campus Agrário de Vairão, Rua Padre Armando Quintas, nº 7
4485-661 Vairão
Porto
PT
+351 252660411
Pedro Beja
  • Proveedor De Los Metadatos
  • Originador
  • Punto De Contacto
Coordinating Researcher
CIBIO-InBIO, Centro de Investigação em Biodiversidade e Recursos Genéticos, Universidade do Porto
Campus Agrário de Vairão, Rua Padre Armando Quintas, nº 7
4485-661 Vairão
Porto
PT
+351 252660411
Pedro Sousa
  • Proveedor De Los Metadatos
Coordinating Researcher
CIBIO-InBIO, Centro de Investigação em Biodiversidade e Recursos Genéticos, Universidade do Porto
Campus Agrário de Vairão, Rua Padre Armando Quintas, nº 7
4485-661 Vairão
Porto
PT
+351 252660411

Cobertura geográfica

Southern Europe and North Africa

Coordenadas límite Latitud Mínima Longitud Mínima [31,214, -8,999], Latitud Máxima Longitud Máxima [43,52, 26,678]

Cobertura taxonómica

This dataset is composed of data relating to 11 Lepidoptera specimens. All specimens were determined to species level. Five species belonging to two genera, Cacochroa Heinemann, 1870 and Rosetea Corley & Ferreira 2019, are represented in the dataset. Both genera belong to the family Depressariidae.

Reino Animalia
Filo Arthropoda
Class Insecta
Orden Lepidoptera
Familia Depressariidae

Cobertura temporal

Fecha Inicial / Fecha Final 1988-05-05 / 2016-08-14

Datos del proyecto

The InBIO Barcoding Initiative aims to develop a reference collection of DNA barcoding sequences covering Portuguese invertebrate taxa. Within the project, a special focus is afforded to insects, given their relevance to food webs, ecosystems functioning, high diversity and limited number of DNA barcoding sequences of interest.

Título The InBIO Barcoding Initiative Database: A taxonomic revision of the Western Palaearctic genus Cacochroa Heinemann, 1870 (Lepidoptera, Depressariidae)
Identificador InBIO Barcoding Initiative
Fuentes de Financiación InBIO Barcoding Initiative is funded by the European Union’s Horizon 2020 Research and Innovation programme under grant agreement No 668981 and by the project PORBIOTA — Portuguese E-Infrastructure for Information and Research on Biodiversity (POCI-01-0145-FEDER-022127), supported by Operational Thematic Program for Competitiveness and Internationalization (POCI), under the PORTUGAL 2020 Partnership Agreement, through the European Regional Development Fund (FEDER).
Descripción del área de estudio Specimens were collected in five European countries, Bulgaria, France, Greece, Italy and Portugal and in two African countries, Morocco and Tunisia, in a total of ten different localities. Sampling was conducted from 1988 to 2016.
Descripción del diseño Specimens in this dataset were collected in field work carried out between 1988 and 2016. Specimens were captured by ten different collectors.

Personas asociadas al proyecto:

Métodos de muestreo

Sampling of specimens was done at ten different localities of seven different countries, Bulgaria, France, Greece, Italy and Portugal in Europe and Morocco and Tunisia in in two Africa. Sampling was conducted between 1988 to 2016. Captured specimens were preserved in 96% ethanol, with one exception kept in dry storage. Preserved specimens are deposited in two Museums: Natural History Museum, London and the Natural History Museum of Denmark, Zoological Collection, University of Copenhagen and in three research collections: Martin Corley’s, Zdenko Tokár’s and Giorgio Baldizzone’s.

Área de Estudio Specimens were collected in ten different localities of seven different countries, most of them bordering the Mediterranean Sea. Sampling was conducted from 1988 to 2016.
Control de Calidad The DNA barcoded specimen morphological identification was contrasted with the results of the Blast of the newly generated DNA barcode in BOLD Identification Engine. Prior submission to GBIF, data was checked for errors and inconsistencies with OpenRefine 3.3 (http://openrefine.org/).

Descripción de la metodología paso a paso:

  1. Sampling of specimens was done at ten different localities of seven different European and African countries., collected between 1988 and 2016.
  2. The captured specimen was preserved in 96% ethanol with a single exception kept in dry storage.
  3. The specimen was morphologically identified using a binocular stereoscopic microscope and resorting to available literature (Corley, 2018; Corley. & Ferreira 2019; Heinemann, 1870; Herrich-Schäffer, [1853−1855] 1847−1855; Lvovsky, 1981 and 2000; Rebel, 1901).
  4. DNA barcodes were sequenced from all specimens. For this, one leg was removed from each individual from which a 658 bp COI DNA barcode fragment was extracted, amplified and sequenced.
  5. The obtained sequences were submitted to BOLD database and the specimens’ morphological identification was contrasted with the results of the BLAST of the newly generated DNA barcode in BOLD Identification Engine.
  6. Prior submission to GBIF, data was checked for errors and inconsistencies with OpenRefine 3.3 (http://openrefine.org/).

Datos de la colección

Nombre de la Colección InBIO Barcoding Initiative
Identificador de la Colección 4ec2b246-f5fa-4b90-9a8d-ddafc2a3f970
Identificador de la Colección Parental CIBIO (Research Center in Biodiversity and Genetic Resources) Portugal
Métodos de preservación de los ejemplares Alcohol
Unidades curatoriales Entre 1 y 10 Voucher tube ,  Entre 1 y 10 DNA extractions

Referencias bibliográficas

  1. Corley, M.F.V. (2018). Taxonomic notes on Portuguese Microlepidoptera I. Cacochroa rosetella Corley, sp. n. (Lepidoptera: Depressariidae, Cryptolechiinae). SHILAP Revista lepidopterología, 46 (181), 75−79.
  2. Corley, M. F. V. & Ferreira, S. (2019). A taxonomic revision of the Western Palaearctic genus Cacochroa Heinemann, 1870 (Lepidoptera, Depressariidae, Cryptolechiinae) with description of a new genus and a new species. Zootaxa, 4683 (2): 197–214. https://doi.org/10.11646/zootaxa.4683.2.2
  3. Heinemann, H. (1870). Die Schmetterlinge Deutschlands und der Schweiz. Kleinschmetterlinge, Series 2, 2 (1). F. Vieweg, Braunschweig, 388 pp.
  4. Herrich-Schäffer, G.A.W. ([1853−1855] 1847−1855). Systematische Bearbeitung der Schmetterlinge von Europa, zugleich als Text, Revision und Supplement zu Jakob Hübner’s Sammlung europäischen Schmetterlinge. 5. Die Schaben und Federmotten. In Commission bei G. J. Manz, Regensburg, 394 pp. [Tineides, 124 p., Pterophides, 7 pls., Micropteryges, 1 pl.]
  5. Lvovsky, A.L. (1981). Oecophoridae. In Medvedev, G.S. (Ed.), Keys to the Insects of the European part of the USSR, IV (2), 1−787.
  6. Lvovsky, A.L. (2000). Cacochroa corfuella sp. n. from Greece (Lepidoptera: Oecophoridae). Zoosystematica rossica, 8, 335−336.
  7. Rebel, H. (1901). Pyralidae—Micropterygidae. In: Staudinger, O. & Rebel, H. (Eds.), Catalog der Lepidopteren des Palaearctischen Faunengebietes. 2. R. Friedländer & Sohn, Berlin, pp. 1–368. https://doi.org/10.5962/bhl.title.120482

Metadatos adicionales

Propósito The InBIO Barcoding Initiative (IBI) aims to develop a reference collection of DNA barcoding sequences primarily covering Portuguese invertebrate taxa providing a tool in ecological studies.
Identificadores alternativos 900a387b-cf8b-479b-b983-69fa973f3bcd
http://ipt.gbif.pt/ipt/resource?r=ibi_lepidoptera_cacochroa