説明
The dataset contains 11 records of moth specimens (Lepidoptera, Depressariidae) collected from 1988 to 2016 in seven South European and North African countries. The study of these specimens resulted in the description of a new genus, Rosetea Corley & Ferreira, 2019. The new genus contains two species previously placed in the genus Cacochroa Heinemann, 1870, Rosetea corfuella (Lvovsky, 2000) and R. rosetella (Corley, 2018), but also a new species, R. sara Corley & Ferreira, 2019, described based on differences found in the male and female genitalia and on DNA barcodes in Corley et al. (2019). Captured specimens were identified to species level and preserved in 96% ethanol, with one exception kept in dry storage. A tissue sample, one leg, was collected from each individual, from which DNA was extracted. The DNA barcoding of these specimens was conducted within the InBIO Barcoding Initiative (IBI), funded by EnvMetaGen and PORBIOTA projects. DNA barcode sequences were deposited in BOLD (Barcode of Life Data System) online database. DNA extracts are deposited in the IBI collection at the CIBIO (Research Center in Biodiversity and Genetic Resources).
データ レコード
この オカレンス（観察データと標本) リソース内のデータは、1 つまたは複数のデータ テーブルとして生物多様性データを共有するための標準化された形式であるダーウィン コア アーカイブ (DwC-A) として公開されています。 コア データ テーブルには、11 レコードが含まれています。
この IPT はデータをアーカイブし、データ リポジトリとして機能します。データとリソースのメタデータは、 ダウンロード セクションからダウンロードできます。 バージョン テーブルから公開可能な他のバージョンを閲覧でき、リソースに加えられた変更を知ることができます。
バージョン
次の表は、公にアクセス可能な公開バージョンのリソースのみ表示しています。
引用方法
研究者はこの研究内容を以下のように引用する必要があります。:
Corley M, Ferreira S, Sousa P, Beja P (2020): The InBIO Barcoding Initiative Database: A taxonomic revision of the Western Palaearctic genus Cacochroa Heinemann, 1870 (Lepidoptera, Depressariidae). v1.0. CIBIO (Research Center in Biodiversity and Genetic Resources) Portugal. Dataset/Occurrence. https://doi.org/10.15468/g5hudd
権利
研究者は権利に関する下記ステートメントを尊重する必要があります。:
パブリッシャーとライセンス保持者権利者は CIBIO (Research Center in Biodiversity and Genetic Resources) Portugal。 This work is licensed under a Creative Commons Attribution (CC-BY 4.0) License.
GBIF登録
このリソースをはGBIF と登録されており GBIF UUID: 900a387b-cf8b-479b-b983-69fa973f3bcdが割り当てられています。 GBIF Portugal によって承認されたデータ パブリッシャーとして GBIF に登録されているCIBIO (Research Center in Biodiversity and Genetic Resources) Portugal が、このリソースをパブリッシュしました。
キーワード
Lepidoptera; Species; Occurrence; Cytochrome c oxidase I (COI); DNA barcode; Europe; Africa; Occurrence
連絡先
- メタデータ提供者 ●
- 最初のデータ採集者
http://orcid.org/0000-0003-4240-8007
- メタデータ提供者 ●
- 最初のデータ採集者 ●
- 連絡先
- メタデータ提供者
- メタデータ提供者 ●
- 最初のデータ採集者 ●
- 連絡先
- メタデータ提供者
地理的範囲
Southern Europe and North Africa
| 座標（緯度経度） | 南 西 [31.214, -8.999], 北 東 [43.52, 26.678] |
|---|
生物分類学的範囲
This dataset is composed of data relating to 11 Lepidoptera specimens. All specimens were determined to species level. Five species belonging to two genera, Cacochroa Heinemann, 1870 and Rosetea Corley & Ferreira 2019, are represented in the dataset. Both genera belong to the family Depressariidae.
| Kingdom | Animalia |
|---|---|
| Phylum | Arthropoda |
| Class | Insecta |
| Order | Lepidoptera |
| Family | Depressariidae |
時間的範囲
| 開始日 / 終了日 | 1988-05-05 / 2016-08-14 |
|---|
プロジェクトデータ
The InBIO Barcoding Initiative aims to develop a reference collection of DNA barcoding sequences covering Portuguese invertebrate taxa. Within the project, a special focus is afforded to insects, given their relevance to food webs, ecosystems functioning, high diversity and limited number of DNA barcoding sequences of interest.
| タイトル | The InBIO Barcoding Initiative Database: A taxonomic revision of the Western Palaearctic genus Cacochroa Heinemann, 1870 (Lepidoptera, Depressariidae) |
|---|---|
| 識別子 | InBIO Barcoding Initiative |
| ファンデイング | InBIO Barcoding Initiative is funded by the European Union’s Horizon 2020 Research and Innovation programme under grant agreement No 668981 and by the project PORBIOTA — Portuguese E-Infrastructure for Information and Research on Biodiversity (POCI-01-0145-FEDER-022127), supported by Operational Thematic Program for Competitiveness and Internationalization (POCI), under the PORTUGAL 2020 Partnership Agreement, through the European Regional Development Fund (FEDER). |
| Study Area Description | Specimens were collected in five European countries, Bulgaria, France, Greece, Italy and Portugal and in two African countries, Morocco and Tunisia, in a total of ten different localities. Sampling was conducted from 1988 to 2016. |
| 研究の意図、目的、背景など（デザイン） | Specimens in this dataset were collected in field work carried out between 1988 and 2016. Specimens were captured by ten different collectors. |
プロジェクトに携わる要員:
収集方法
Sampling of specimens was done at ten different localities of seven different countries, Bulgaria, France, Greece, Italy and Portugal in Europe and Morocco and Tunisia in in two Africa. Sampling was conducted between 1988 to 2016. Captured specimens were preserved in 96% ethanol, with one exception kept in dry storage. Preserved specimens are deposited in two Museums: Natural History Museum, London and the Natural History Museum of Denmark, Zoological Collection, University of Copenhagen and in three research collections: Martin Corley’s, Zdenko Tokár’s and Giorgio Baldizzone’s.
| Study Extent | Specimens were collected in ten different localities of seven different countries, most of them bordering the Mediterranean Sea. Sampling was conducted from 1988 to 2016. |
|---|---|
| Quality Control | The DNA barcoded specimen morphological identification was contrasted with the results of the Blast of the newly generated DNA barcode in BOLD Identification Engine. Prior submission to GBIF, data was checked for errors and inconsistencies with OpenRefine 3.3 (http://openrefine.org/). |
Method step description:
- Sampling of specimens was done at ten different localities of seven different European and African countries., collected between 1988 and 2016.
- The captured specimen was preserved in 96% ethanol with a single exception kept in dry storage.
- The specimen was morphologically identified using a binocular stereoscopic microscope and resorting to available literature (Corley, 2018; Corley. & Ferreira 2019; Heinemann, 1870; Herrich-Schäffer, [1853−1855] 1847−1855; Lvovsky, 1981 and 2000; Rebel, 1901).
- DNA barcodes were sequenced from all specimens. For this, one leg was removed from each individual from which a 658 bp COI DNA barcode fragment was extracted, amplified and sequenced.
- The obtained sequences were submitted to BOLD database and the specimens’ morphological identification was contrasted with the results of the BLAST of the newly generated DNA barcode in BOLD Identification Engine.
- Prior submission to GBIF, data was checked for errors and inconsistencies with OpenRefine 3.3 (http://openrefine.org/).
コレクションデータ
| コレクション名 | InBIO Barcoding Initiative |
|---|---|
| コレクション識別子 | 4ec2b246-f5fa-4b90-9a8d-ddafc2a3f970 |
| Parent Collection Identifier | CIBIO (Research Center in Biodiversity and Genetic Resources) Portugal |
| 標本保存方法 | Alcohol |
|---|
| Curatorialユニット | 範囲 1 ～ 10 Voucher tube , 範囲 1 ～ 10 DNA extractions |
|---|
書誌情報の引用
- Corley, M.F.V. (2018). Taxonomic notes on Portuguese Microlepidoptera I. Cacochroa rosetella Corley, sp. n. (Lepidoptera: Depressariidae, Cryptolechiinae). SHILAP Revista lepidopterología, 46 (181), 75−79.
- Corley, M. F. V. & Ferreira, S. (2019). A taxonomic revision of the Western Palaearctic genus Cacochroa Heinemann, 1870 (Lepidoptera, Depressariidae, Cryptolechiinae) with description of a new genus and a new species. Zootaxa, 4683 (2): 197–214. https://doi.org/10.11646/zootaxa.4683.2.2
- Heinemann, H. (1870). Die Schmetterlinge Deutschlands und der Schweiz. Kleinschmetterlinge, Series 2, 2 (1). F. Vieweg, Braunschweig, 388 pp.
- Herrich-Schäffer, G.A.W. ([1853−1855] 1847−1855). Systematische Bearbeitung der Schmetterlinge von Europa, zugleich als Text, Revision und Supplement zu Jakob Hübner’s Sammlung europäischen Schmetterlinge. 5. Die Schaben und Federmotten. In Commission bei G. J. Manz, Regensburg, 394 pp. [Tineides, 124 p., Pterophides, 7 pls., Micropteryges, 1 pl.]
- Lvovsky, A.L. (1981). Oecophoridae. In Medvedev, G.S. (Ed.), Keys to the Insects of the European part of the USSR, IV (2), 1−787.
- Lvovsky, A.L. (2000). Cacochroa corfuella sp. n. from Greece (Lepidoptera: Oecophoridae). Zoosystematica rossica, 8, 335−336.
- Rebel, H. (1901). Pyralidae—Micropterygidae. In: Staudinger, O. & Rebel, H. (Eds.), Catalog der Lepidopteren des Palaearctischen Faunengebietes. 2. R. Friedländer & Sohn, Berlin, pp. 1–368. https://doi.org/10.5962/bhl.title.120482
追加のメタデータ
| 目的 | The InBIO Barcoding Initiative (IBI) aims to develop a reference collection of DNA barcoding sequences primarily covering Portuguese invertebrate taxa providing a tool in ecological studies. |
|---|---|
| 代替識別子 | 900a387b-cf8b-479b-b983-69fa973f3bcd |
| http://ipt.gbif.pt/ipt/resource?r=ibi_lepidoptera_cacochroa |