Описание
The dataset contains 11 records of moth specimens (Lepidoptera, Depressariidae) collected from 1988 to 2016 in seven South European and North African countries. The study of these specimens resulted in the description of a new genus, Rosetea Corley & Ferreira, 2019. The new genus contains two species previously placed in the genus Cacochroa Heinemann, 1870, Rosetea corfuella (Lvovsky, 2000) and R. rosetella (Corley, 2018), but also a new species, R. sara Corley & Ferreira, 2019, described based on differences found in the male and female genitalia and on DNA barcodes in Corley et al. (2019). Captured specimens were identified to species level and preserved in 96% ethanol, with one exception kept in dry storage. A tissue sample, one leg, was collected from each individual, from which DNA was extracted. The DNA barcoding of these specimens was conducted within the InBIO Barcoding Initiative (IBI), funded by EnvMetaGen and PORBIOTA projects. DNA barcode sequences were deposited in BOLD (Barcode of Life Data System) online database. DNA extracts are deposited in the IBI collection at the CIBIO (Research Center in Biodiversity and Genetic Resources).
Записи данных
Данные этого occurrence ресурса были опубликованы в виде Darwin Core Archive (DwC-A), который является стандартным форматом для обмена данными о биоразнообразии в виде набора из одной или нескольких таблиц. Основная таблица данных содержит 11 записей.
Данный экземпляр IPT архивирует данные и таким образом служит хранилищем данных. Данные и метаданные ресурсов доступны для скачивания в разделе Загрузки. В таблице версий перечислены другие версии ресурса, которые были доступны публично, что позволяет отслеживать изменения, внесенные в ресурс с течением времени.
Версии
В таблице ниже указаны только опубликованные версии ресурса, которые доступны для свободного скачивания.
Как оформить ссылку
Исследователи должны дать ссылку на эту работу следующим образом:
Corley M, Ferreira S, Sousa P, Beja P (2020): The InBIO Barcoding Initiative Database: A taxonomic revision of the Western Palaearctic genus Cacochroa Heinemann, 1870 (Lepidoptera, Depressariidae). v1.0. CIBIO (Research Center in Biodiversity and Genetic Resources) Portugal. Dataset/Occurrence. https://doi.org/10.15468/g5hudd
Права
Исследователи должны соблюдать следующие права:
Публикующей организацией и владельцем прав на данную работу является CIBIO (Research Center in Biodiversity and Genetic Resources) Portugal. Эта работа находится под лицензией Creative Commons Attribution (CC-BY 4.0).
Регистрация в GBIF
Этот ресурс был зарегистрирован в GBIF, ему был присвоен следующий UUID: 900a387b-cf8b-479b-b983-69fa973f3bcd. CIBIO (Research Center in Biodiversity and Genetic Resources) Portugal отвечает за публикацию этого ресурса, и зарегистрирован в GBIF как издатель данных при оподдержке GBIF Portugal.
Ключевые слова
Lepidoptera; Species; Occurrence; Cytochrome c oxidase I (COI); DNA barcode; Europe; Africa; Occurrence
Контакты
- Metadata Provider ●
- Originator
http://orcid.org/0000-0003-4240-8007
- Metadata Provider ●
- Originator ●
- Point Of Contact
- Metadata Provider
- Metadata Provider ●
- Originator ●
- Point Of Contact
- Metadata Provider
Географический охват
Southern Europe and North Africa
| Ограничивающие координаты | Юг Запад [31,214, -8,999], Север Восток [43,52, 26,678] |
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Таксономический охват
This dataset is composed of data relating to 11 Lepidoptera specimens. All specimens were determined to species level. Five species belonging to two genera, Cacochroa Heinemann, 1870 and Rosetea Corley & Ferreira 2019, are represented in the dataset. Both genera belong to the family Depressariidae.
| Kingdom | Animalia |
|---|---|
| Phylum | Arthropoda |
| Class | Insecta |
| Order | Lepidoptera |
| Family | Depressariidae |
Временной охват
| Дата начала / Дата окончания | 1988-05-05 / 2016-08-14 |
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Данные проекта
The InBIO Barcoding Initiative aims to develop a reference collection of DNA barcoding sequences covering Portuguese invertebrate taxa. Within the project, a special focus is afforded to insects, given their relevance to food webs, ecosystems functioning, high diversity and limited number of DNA barcoding sequences of interest.
| Название | The InBIO Barcoding Initiative Database: A taxonomic revision of the Western Palaearctic genus Cacochroa Heinemann, 1870 (Lepidoptera, Depressariidae) |
|---|---|
| Идентификатор | InBIO Barcoding Initiative |
| Финансирование | InBIO Barcoding Initiative is funded by the European Union’s Horizon 2020 Research and Innovation programme under grant agreement No 668981 and by the project PORBIOTA — Portuguese E-Infrastructure for Information and Research on Biodiversity (POCI-01-0145-FEDER-022127), supported by Operational Thematic Program for Competitiveness and Internationalization (POCI), under the PORTUGAL 2020 Partnership Agreement, through the European Regional Development Fund (FEDER). |
| Описание района исследования | Specimens were collected in five European countries, Bulgaria, France, Greece, Italy and Portugal and in two African countries, Morocco and Tunisia, in a total of ten different localities. Sampling was conducted from 1988 to 2016. |
| Описание плана выполнения исследований | Specimens in this dataset were collected in field work carried out between 1988 and 2016. Specimens were captured by ten different collectors. |
Исполнители проекта:
Методы сбора
Sampling of specimens was done at ten different localities of seven different countries, Bulgaria, France, Greece, Italy and Portugal in Europe and Morocco and Tunisia in in two Africa. Sampling was conducted between 1988 to 2016. Captured specimens were preserved in 96% ethanol, with one exception kept in dry storage. Preserved specimens are deposited in two Museums: Natural History Museum, London and the Natural History Museum of Denmark, Zoological Collection, University of Copenhagen and in three research collections: Martin Corley’s, Zdenko Tokár’s and Giorgio Baldizzone’s.
| Охват исследования | Specimens were collected in ten different localities of seven different countries, most of them bordering the Mediterranean Sea. Sampling was conducted from 1988 to 2016. |
|---|---|
| Контроль качества | The DNA barcoded specimen morphological identification was contrasted with the results of the Blast of the newly generated DNA barcode in BOLD Identification Engine. Prior submission to GBIF, data was checked for errors and inconsistencies with OpenRefine 3.3 (http://openrefine.org/). |
Описание этапа методики:
- Sampling of specimens was done at ten different localities of seven different European and African countries., collected between 1988 and 2016.
- The captured specimen was preserved in 96% ethanol with a single exception kept in dry storage.
- The specimen was morphologically identified using a binocular stereoscopic microscope and resorting to available literature (Corley, 2018; Corley. & Ferreira 2019; Heinemann, 1870; Herrich-Schäffer, [1853−1855] 1847−1855; Lvovsky, 1981 and 2000; Rebel, 1901).
- DNA barcodes were sequenced from all specimens. For this, one leg was removed from each individual from which a 658 bp COI DNA barcode fragment was extracted, amplified and sequenced.
- The obtained sequences were submitted to BOLD database and the specimens’ morphological identification was contrasted with the results of the BLAST of the newly generated DNA barcode in BOLD Identification Engine.
- Prior submission to GBIF, data was checked for errors and inconsistencies with OpenRefine 3.3 (http://openrefine.org/).
Данные коллекции
| Название коллекции | InBIO Barcoding Initiative |
|---|---|
| Идентификатор коллекции | 4ec2b246-f5fa-4b90-9a8d-ddafc2a3f970 |
| Идентификатор родительской коллекции | CIBIO (Research Center in Biodiversity and Genetic Resources) Portugal |
| Методы сохранения образцов | Alcohol |
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| Единицы хранения | Между 1 и 10 Voucher tube , Между 1 и 10 DNA extractions |
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Библиографические ссылки
- Corley, M.F.V. (2018). Taxonomic notes on Portuguese Microlepidoptera I. Cacochroa rosetella Corley, sp. n. (Lepidoptera: Depressariidae, Cryptolechiinae). SHILAP Revista lepidopterología, 46 (181), 75−79.
- Corley, M. F. V. & Ferreira, S. (2019). A taxonomic revision of the Western Palaearctic genus Cacochroa Heinemann, 1870 (Lepidoptera, Depressariidae, Cryptolechiinae) with description of a new genus and a new species. Zootaxa, 4683 (2): 197–214. https://doi.org/10.11646/zootaxa.4683.2.2
- Heinemann, H. (1870). Die Schmetterlinge Deutschlands und der Schweiz. Kleinschmetterlinge, Series 2, 2 (1). F. Vieweg, Braunschweig, 388 pp.
- Herrich-Schäffer, G.A.W. ([1853−1855] 1847−1855). Systematische Bearbeitung der Schmetterlinge von Europa, zugleich als Text, Revision und Supplement zu Jakob Hübner’s Sammlung europäischen Schmetterlinge. 5. Die Schaben und Federmotten. In Commission bei G. J. Manz, Regensburg, 394 pp. [Tineides, 124 p., Pterophides, 7 pls., Micropteryges, 1 pl.]
- Lvovsky, A.L. (1981). Oecophoridae. In Medvedev, G.S. (Ed.), Keys to the Insects of the European part of the USSR, IV (2), 1−787.
- Lvovsky, A.L. (2000). Cacochroa corfuella sp. n. from Greece (Lepidoptera: Oecophoridae). Zoosystematica rossica, 8, 335−336.
- Rebel, H. (1901). Pyralidae—Micropterygidae. In: Staudinger, O. & Rebel, H. (Eds.), Catalog der Lepidopteren des Palaearctischen Faunengebietes. 2. R. Friedländer & Sohn, Berlin, pp. 1–368. https://doi.org/10.5962/bhl.title.120482
Дополнительные метаданные
| Цель | The InBIO Barcoding Initiative (IBI) aims to develop a reference collection of DNA barcoding sequences primarily covering Portuguese invertebrate taxa providing a tool in ecological studies. |
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| Альтернативные идентификаторы | 900a387b-cf8b-479b-b983-69fa973f3bcd |
| http://ipt.gbif.pt/ipt/resource?r=ibi_lepidoptera_cacochroa |