Registros biológicos

The InBIO Barcoding Initiative Database: Depressaria infernella Corley & Buchner, a new Iberian species of the Depressaria douglasella group

Última versión Publicado por CIBIO (Research Center in Biodiversity and Genetic Resources) Portugal en 5 de enero de 2021 CIBIO (Research Center in Biodiversity and Genetic Resources) Portugal
The dataset contains two records of moth specimens (Lepidoptera, Depressariidae) collected in 2011 and 2015 in continental Portugal. The study of these specimens resulted in the description of a new Portuguese endemic species, Depressaria infernella Corley & Buchner, 2019 based on differences found in the male and female genitalia and DNA barcodes in Corley et al. (2019). Specimens were detected and captured using a mercury-vapor lamp to attract the insects. Captured specimens were identified to species level and preserved in 96% ethanol or in dry storage. From each specimen a tissue sample, one leg, was removed to be used for DNA extraction. The DNA barcoding of these specimens was conducted within the InBIO Barcoding Initiative (IBI), funded by EnvMetaGen and PORBIOTA projects. DNA barco... Más

Descripción

The dataset contains two records of moth specimens (Lepidoptera, Depressariidae) collected in 2011 and 2015 in continental Portugal. The study of these specimens resulted in the description of a new Portuguese endemic species, Depressaria infernella Corley & Buchner, 2019 based on differences found in the male and female genitalia and DNA barcodes in Corley et al. (2019). Specimens were detected and captured using a mercury-vapor lamp to attract the insects. Captured specimens were identified to species level and preserved in 96% ethanol or in dry storage. From each specimen a tissue sample, one leg, was removed to be used for DNA extraction. The DNA barcoding of these specimens was conducted within the InBIO Barcoding Initiative (IBI), funded by EnvMetaGen and PORBIOTA projects. DNA barcode sequences were deposited in BOLD (Barcode of Life Data System) online database. Collected specimens and DNA extracts are deposited in the IBI collection at the CIBIO (Research Center in Biodiversity and Genetic Resources).

Registros

Los datos en este recurso de registros biológicos han sido publicados como Archivo Darwin Core(DwC-A), el cual es un formato estándar para compartir datos de biodiversidad como un conjunto de una o más tablas de datos. La tabla de datos del core contiene 2 registros.

Este IPT archiva los datos y, por lo tanto, sirve como repositorio de datos. Los datos y los metadatos del recurso están disponibles para su descarga en la sección descargas. La tabla versiones enumera otras versiones del recurso que se han puesto a disposición del público y permite seguir los cambios realizados en el recurso a lo largo del tiempo.

Descargas

Descargue la última versión de los datos como un Archivo Darwin Core (DwC-A) o los metadatos como EML o RTF:

Datos como un archivo DwC-A descargar 2 registros en Inglés (7 kB) - Frecuencia de actualización: cuando sea necesario
Metadatos como un archivo EML descargar en Inglés (23 kB)
Metadatos como un archivo RTF descargar en Inglés (17 kB)

Versiones

La siguiente tabla muestra sólo las versiones publicadas del recurso que son de acceso público.

¿Cómo referenciar?

Los usuarios deben citar este trabajo de la siguiente manera:

Corley M, Ferreira S, Buchner P, Sousa P, Beja P (2020): The InBIO Barcoding Initiative Database: Depressaria infernella Corley & Buchner, a new Iberian species of the Depressaria douglasella group. v1.0. CIBIO (Research Center in Biodiversity and Genetic Resources) Portugal. Dataset/Occurrence. https://doi.org/10.15468/gcg7ny

Derechos

Los usuarios deben respetar los siguientes derechos de uso:

El publicador y propietario de los derechos de este trabajo es CIBIO (Research Center in Biodiversity and Genetic Resources) Portugal. Este trabajo está autorizado bajo una Licencia Creative Commons Atribución/Reconocimiento 4.0 Internacional (CC-BY) 4.0.

Registro GBIF

Este recurso ha sido registrado en GBIF con el siguiente UUID: f90de717-7b3f-483f-aca2-46c300fe36a8.  CIBIO (Research Center in Biodiversity and Genetic Resources) Portugal publica este recurso y está registrado en GBIF como un publicador de datos avalado por GBIF Portugal.

Palabras clave

Lepidoptera; Species; Occurrence; Cytochrome c oxidase I (COI); DNA barcode; Continental Portugal; Occurrence

Contactos

¿Quién creó el recurso?:

Martin Corley
Researcher
Pucketty Farm Cottage
SN7 8JP Faringdon
Oxfordshire
GB
Sónia Ferreira
Post-Doc Researcher
CIBIO-InBIO, Centro de Investigação em Biodiversidade e Recursos Genéticos, Universidade do Porto
Campus Agrário de Vairão, Rua Padre Armando Quintas, nº 7
4485-661 Vairão
Porto
PT
+351 252660411
Peter Buchner
Researcher
A-2625 Schwarzau am Steinfeld
AT
Pedro Sousa
Post-Doc Researcher
CIBIO-InBIO, Centro de Investigação em Biodiversidade e Recursos Genéticos, Universidade do Porto
Campus Agrário de Vairão, Rua Padre Armando Quintas, nº 7
4485-661 Vairão
Porto
PT
+351 252660411
Pedro Beja
Coordinating Researcher
CIBIO-InBIO, Centro de Investigação em Biodiversidade e Recursos Genéticos, Universidade do Porto
Campus Agrário de Vairão, Rua Padre Armando Quintas, nº 7
4485-661 Vairão
Porto
PT
+351 252660411

¿Quién puede resolver dudas acerca del recurso?:

Pedro Beja
Coordinating Researcher
CIBIO-InBIO, Centro de Investigação em Biodiversidade e Recursos Genéticos, Universidade do Porto
Campus Agrário de Vairão, Rua Padre Armando Quintas, nº 7
4485-661 Vairão
Porto
PT
+351 252660411
Sónia Ferreira
Post-Doc Researcher
CIBIO-InBIO, Centro de Investigação em Biodiversidade e Recursos Genéticos, Universidade do Porto
Campus Agrário de Vairão, Rua Padre Armando Quintas, nº 7
4485-661 Vairão
Porto
PT
+351 252660411

¿Quién documentó los metadatos?:

Martin Corley
Researcher
Pucketty Farm Cottage
SN7 8JP Faringdon
Oxfordshire
GB
Sónia Ferreira
Post-Doc Researcher
CIBIO-InBIO, Centro de Investigação em Biodiversidade e Recursos Genéticos, Universidade do Porto
Campus Agrário de Vairão, Rua Padre Armando Quintas, nº 7
4485-661 Vairão
Porto
PT
+351 252660411
Peter Buchner
Researcher
A-2625 Schwarzau am Steinfeld
AT
Pedro Sousa
Post-Doc Researcher
CIBIO-InBIO, Centro de Investigação em Biodiversidade e Recursos Genéticos, Universidade do Porto
Campus Agrário de Vairão, Rua Padre Armando Quintas, nº 7
4485-661 Vairão
Porto
PT
+351 252660411
Pedro Beja
Coordinating Researcher
CIBIO-InBIO, Centro de Investigação em Biodiversidade e Recursos Genéticos, Universidade do Porto
Campus Agrário de Vairão, Rua Padre Armando Quintas, nº 7
4485-661 Vairão
Porto
PT
+351 252660411

Cobertura geográfica

Continental Portugal.

Coordenadas límite Latitud Mínima Longitud Mínima [40,326, -7,573], Latitud Máxima Longitud Máxima [41,766, -6,902]

Cobertura taxonómica

This dataset is composed of data relating to two Lepidoptera specimens. Both specimens were determined to species level. The dataset is composed of two species, Depressaria infernella Corley & Buchner, 2019 and Agonopterix scopariella (Heinemann, 1870). Both species belong to the family Depressariidae.

Reino  Animalia
Filo  Arthropoda
Class  Insecta
Orden  Lepidoptera
Familia  Depressariidae

Cobertura temporal

Fecha Inicial / Fecha Final 2011-08-05 / 2015-06-19

Datos del proyecto

The InBIO Barcoding Initiative aims to develop a reference collection of DNA barcoding sequences covering Portuguese invertebrate taxa. Within the project, a special focus is afforded to insects, given their relevance to food webs, ecosystems functioning, high diversity and limited number of DNA barcoding sequences of interest.

Título The InBIO Barcoding Initiative Database: Depressaria infernella Corley & Buchner, a new Iberian species of the Depressaria douglasella group
Identificador InBIO Barcoding Initiative
Fuentes de Financiación InBIO Barcoding Initiative is funded by the European Union’s Horizon 2020 Research and Innovation programme under grant agreement No 668981 and by the project PORBIOTA — Portuguese E-Infrastructure for Information and Research on Biodiversity (POCI-01-0145-FEDER-022127), supported by Operational Thematic Program for Competitiveness and Internationalization (POCI), under the PORTUGAL 2020 Partnership Agreement, through the European Regional Development Fund (FEDER).
Descripción del área de estudio The two specimens were collected in the districts of Bragança and Guarda, in Continental Portugal, in 2011 and 2015.
Descripción del diseño The specimens in this dataset were collected in Continental Portugal in two field work incursions carried out in 2011 and 2015. Specimens were detected using a mercury-vapor lamps as lures.

Personas asociadas al proyecto:

Autor
Sónia Ferreira
Autor
Peter Buchner
Originador
Pedro Sousa

Métodos de muestreo

Specimens were captured in 2011 and 2015 in continental Portugal uisng mercury-vapor lamps as lures. Captured insects were preserved in 96% ethanol or in dry storage and stored at the InBIO Barcoding Initiative reference collection for downstream molecular analysis. Collected specimens were morphologically identified using a binocular stereoscopic microscope.

Área de Estudio Specimens were collected in Continental Portugal in two field work incursions carried out in 2011 and 2015.
Control de Calidad The DNA barcoded specimen morphological identification was contrasted with the results of the Blast of the newly generated DNA barcode in BOLD Identification Engine. Prior submission to GBIF, data was checked for errors and inconsistencies with OpenRefine 3.3 (http://openrefine.org/).

Descripción de la metodología paso a paso:

  1. Specimens were captured in two localities of continental Portugal, in 2011 and 2015, using mercury-vapor lamps as lures.
  2. Captured specimens were preserved in 96% ethanol or in dry storage.
  3. The specimens were morphologically identified using a binocular stereoscopic microscope and resorting to available literature (Corley, Buchner & Ferreira, 2019; Hannemann, 1953; Palm, 1989.)
  4. A DNA barcode was sequenced from a tissue sample, one leg, that was removed. DNA was then extracted, and a 658 bp COI DNA barcode fragment was amplified and sequenced.
  5. The obtained sequences were submitted to BOLD database and the specimen morphological identification was contrasted with the results of the BLAST of the newly generated DNA barcode in BOLD Identification Engine.
  6. Prior submission to GBIF, data was checked for errors and inconsistencies with OpenRefine 3.3 (http://openrefine.org/).

Datos de la colección

Nombre de la Colección InBIO Barcoding Initiative
Identificador de la Colección 4ec2b246-f5fa-4b90-9a8d-ddafc2a3f970
Identificador de la Colección Parental CIBIO (Research Center in Biodiversity and Genetic Resources) Portugal
Métodos de preservación de los ejemplares Alcohol
Unidades curatoriales Entre 1 y 2 Voucher tube ,  Entre 1 y 2 DNA extractions

Referencias bibliográficas

  1. Corley, M. F. V., Buchner, P. & Ferreira, S. (2019). Depressaria infernella Corley & Buchner, a new Iberian species of the Depressaria douglasella group (Lepidoptera: Depressariidae). SHILAP, Revista de Lepidopterología, 47(186): 293-300.
  2. Hannemann, H. J., 1953. Natürliche Gruppierung der europäischen Arten der Gattung Depressaria s. l. (Lep. Oecoph.).– Mitteilungen aus dem Zoologischen Museum in Berlin, 29: 269-373.
  3. Palm, E., 1989. Nordeuropas Prydvinger (Lepidoptera: Oecophoridae).– Danmarks Dyreliv, 4: 1-247.

Metadatos adicionales

Propósito The InBIO Barcoding Initiative (IBI) aims to develop a reference collection of DNA barcoding sequences primarily covering Portuguese invertebrate taxa providing a tool in ecological studies.
Identificadores alternativos f90de717-7b3f-483f-aca2-46c300fe36a8
http://ipt.gbif.pt/ipt/resource?r=ibi_lepidoptera_depressaria_infernella