説明
The dataset contains three records of moth specimens of the family Gelechiidae collected from 2015 to 2018 in continental Portugal. The study of these specimens resulted in the description of a new genus, Mondeguina Corley & Rosete, 2020, a new species M. atlanticella Corley & Rosete, 2020, and a new genus placement for Catatinagma agenjoi (Gozmány, 1954) previously in the genus Apatetris Staudinger, 1880 (Corley et al. (2020)). The new genus contains M. mediterranella (Nel & Varenne, 2012) and M. atlanticella Corley & Rosete, 2020, a new Portuguese endemic species, described based on differences found in the male and female genitalia and on DNA barcodes. Specimens were detected and captured using mercury-vapor lamps to attract the insects. Captured specimens were identified to species level and preserved in 96% ethanol. A tissue sample, a leg, was collected from each individual, from which DNA was extracted. The DNA barcoding of these specimens was conducted within the InBIO Barcoding Initiative (IBI), funded by EnvMetaGen and PORBIOTA projects. DNA barcode sequences were deposited in BOLD (Barcode of Life Data System) online database. DNA extracts are deposited in the IBI collection at the CIBIO (Research Center in Biodiversity and Genetic Resources).
データ レコード
この オカレンス（観察データと標本) リソース内のデータは、1 つまたは複数のデータ テーブルとして生物多様性データを共有するための標準化された形式であるダーウィン コア アーカイブ (DwC-A) として公開されています。 コア データ テーブルには、3 レコードが含まれています。
この IPT はデータをアーカイブし、データ リポジトリとして機能します。データとリソースのメタデータは、 ダウンロード セクションからダウンロードできます。 バージョン テーブルから公開可能な他のバージョンを閲覧でき、リソースに加えられた変更を知ることができます。
バージョン
次の表は、公にアクセス可能な公開バージョンのリソースのみ表示しています。
引用方法
研究者はこの研究内容を以下のように引用する必要があります。:
Corley M, Ferreira S, Rosete J, Sousa P, Beja P (2020): The InBIO Barcoding Initiative Database: Mondeguina, a new genus for Apatetris mediterranella Nel & Varenne, 2012, with description of a new species from Portugal (Lepidoptera, Gelechiidae). v1.1. CIBIO (Research Center in Biodiversity and Genetic Resources) Portugal. Dataset/Occurrence. https://doi.org/10.15468/au3pbu
権利
研究者は権利に関する下記ステートメントを尊重する必要があります。:
パブリッシャーとライセンス保持者権利者は CIBIO (Research Center in Biodiversity and Genetic Resources) Portugal。 This work is licensed under a Creative Commons Attribution (CC-BY 4.0) License.
GBIF登録
このリソースをはGBIF と登録されており GBIF UUID: 2c5df391-3d22-4c92-b039-bed10c1f62c0が割り当てられています。 GBIF Portugal によって承認されたデータ パブリッシャーとして GBIF に登録されているCIBIO (Research Center in Biodiversity and Genetic Resources) Portugal が、このリソースをパブリッシュしました。
キーワード
Lepidoptera; Species; Occurrence; Cytochrome c oxidase I (COI); DNA barcode; Continental Portugal; Occurrence
連絡先
- メタデータ提供者 ●
- 最初のデータ採集者
http://orcid.org/0000-0003-4240-8007
- メタデータ提供者 ●
- 最初のデータ採集者 ●
- 連絡先
- メタデータ提供者 ●
- 最初のデータ採集者
- メタデータ提供者 ●
- 最初のデータ採集者
- メタデータ提供者 ●
- 最初のデータ採集者 ●
- 連絡先
地理的範囲
Continental Portugal.
| 座標（緯度経度） | 南 西 [39.68, -8.871], 北 東 [40.135, -7.098] |
|---|
生物分類学的範囲
This dataset is composed of data relating to three Lepidoptera specimens. All specimens were determined to species level. Specimens belong to the genera Mondeguina Corley & Rosete, 2020 and Catatinagma Rebel, 1903, and the family Gelechiidae.
| Kingdom | Animalia |
|---|---|
| Phylum | Arthropoda |
| Class | Insecta |
| Order | Lepidoptera |
| Family | Gelechiidae |
時間的範囲
| 開始日 / 終了日 | 2015-06-23 / 2018-05-14 |
|---|
プロジェクトデータ
The InBIO Barcoding Initiative aims to develop a reference collection of DNA barcoding sequences covering Portuguese invertebrate taxa. Within the project, a special focus is afforded to insects, given their relevance to food webs, ecosystems functioning, high diversity and limited number of DNA barcoding sequences of interest.
| タイトル | The InBIO Barcoding Initiative Database: Mondeguina, a new genus for Apatetris mediterranella Nel & Varenne, 2012, with description of a new species from Portugal (Lepidoptera, Gelechiidae) |
|---|---|
| 識別子 | InBIO Barcoding Initiative |
| ファンデイング | InBIO Barcoding Initiative is funded by the European Union’s Horizon 2020 Research and Innovation programme under grant agreement No 668981 and by the project PORBIOTA — Portuguese E-Infrastructure for Information and Research on Biodiversity (POCI-01-0145-FEDER-022127), supported by Operational Thematic Program for Competitiveness and Internationalization (POCI), under the PORTUGAL 2020 Partnership Agreement, through the European Regional Development Fund (FEDER). |
| Study Area Description | Specimens were collected in continental Portugal, in a total of three different localities. Sampling was conducted from 2015 to 2018. |
| 研究の意図、目的、背景など（デザイン） | Specimens in this dataset were collected in field work carried out between 2015 to 2018. Specimens were captured using mercury-vapor lamps to attract the insects. |
プロジェクトに携わる要員:
収集方法
Sampling of specimens was done at three different localities of continental Portugal. Sampling was conducted between 2015 to 2018. Captured specimens were preserved in 96% and morphologically identified. DNA extracts are deposited in the InBIO Barcoding Initiative reference collection for downstream molecular analysis.
| Study Extent | Specimens were collected in three different localities of continental Portugal. Sampling was conducted from 2015 to 2018. |
|---|---|
| Quality Control | The DNA barcoded specimen morphological identification was contrasted with the results of the Blast of the newly generated DNA barcode in BOLD Identification Engine. Prior submission to GBIF, data was checked for errors and inconsistencies with OpenRefine 3.3 (http://openrefine.org/). |
Method step description:
- Sampling of specimens was done at three different localities of continental Portugal, between 2015 and 2018. Specimens were detected and captured at night by using mercury-vapor lamps as lures, although part of the specimens were collected a few metres away from the light, resting on grasses.
- The captured specimens were preserved in 96% ethanol.
- The specimens were morphologically identified using a binocular stereoscopic microscope and resorting to available literature (Corley, Rosete & Ferreira, 2017; Gozmány, 1954; Janse, 1949–1954, Junnilainen & Nupponen, 2010; Nel & Varenne, 2012; Sakamaki, 2000; Staudinger, 1880).
- DNA barcodes were sequenced from all specimens. For this, one leg was removed from each individual from which a 658 bp COI DNA barcode fragment was extracted, amplified and sequenced.
- The obtained sequences were submitted to BOLD database and the specimens’ morphological identification was contrasted with the results of the BLAST of the newly generated DNA barcode in BOLD Identification Engine.
- Prior submission to GBIF, data was checked for errors and inconsistencies with OpenRefine 3.3 (http://openrefine.org/).
コレクションデータ
| コレクション名 | InBIO Barcoding Initiative |
|---|---|
| コレクション識別子 | 4ec2b246-f5fa-4b90-9a8d-ddafc2a3f970 |
| Parent Collection Identifier | CIBIO (Research Center in Biodiversity and Genetic Resources) Portugal |
| 標本保存方法 | Alcohol |
|---|
| Curatorialユニット | 範囲 1 ～ 3 Voucher tube , 範囲 1 ～ 3 DNA extractions |
|---|
書誌情報の引用
- Corley, M.F.V., Rosete, J. & Ferreira, S. (2017). Mondeguina, a new genus for Apatetris mediterranella Nel & Varenne, 2012, with description of a new species from Portugal (Lepidoptera, Gelechiidae). Nota Lepidopterologica, 43: 151–166. https://doi.org/10.3897/nl.43.50430
- Gozmány, L.A. (1954). Studies on Microlepidoptera. Annales Historico-naturales Musei Nationalis Hungarici 5: 273–285.
- Janse, A.J.T. (1949–1954). The Moths of South Africa 5. Transvaal Museum, Pretoria, Gelechiadae iv + 464 pp. 202 pls.]
- Junnilainen, J. & Nupponen, K. (2010). The gelechiid fauna of the southern Ural Mountains, part I: descriptions of seventeen new species (Lepidoptera: Gelechiidae). Zootaxa 2366: 1–34. https://doi.org/10.11646/zootaxa.2366.1.1
- Nel, J. & Varenne, T. (2012). Description d’Apatetris (s. l.) mediterranella sp. n. du littoral méditerranéen de France et d’Italie (Gelechiidae, Gelechiinae, Apatetrini). Nota lepidopterologica 35: 27–32.
- Sakamaki, Y. (2000). Japanese species of the genus Apatetris (Lepidoptera, Gelechiidae). Tijdschrift voor Entomologie 143: 211–220. https://doi.org/10.1163/22119434-99900046
- Staudinger, O. (1880). Lepidopteren-Fauna Kleinasien’s. Horae Societatis Entomologicae Rossicae 15: 159–435.
追加のメタデータ
| 目的 | The InBIO Barcoding Initiative (IBI) aims to develop a reference collection of DNA barcoding sequences primarily covering Portuguese invertebrate taxa providing a tool in ecological studies. |
|---|---|
| 代替識別子 | 2c5df391-3d22-4c92-b039-bed10c1f62c0 |
| http://ipt.gbif.pt/ipt/resource?r=ibi_lepidoptera_mondeguina |