出現紀錄

The InBIO Barcoding Initiative Database: Mondeguina, a new genus for Apatetris mediterranella Nel & Varenne, 2012, with description of a new species from Portugal (Lepidoptera, Gelechiidae)

最新版本 由 CIBIO (Research Center in Biodiversity and Genetic Resources) Portugal 發佈於 2021年1月5日 CIBIO (Research Center in Biodiversity and Genetic Resources) Portugal

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說明

The dataset contains three records of moth specimens of the family Gelechiidae collected from 2015 to 2018 in continental Portugal. The study of these specimens resulted in the description of a new genus, Mondeguina Corley & Rosete, 2020, a new species M. atlanticella Corley & Rosete, 2020, and a new genus placement for Catatinagma agenjoi (Gozmány, 1954) previously in the genus Apatetris Staudinger, 1880 (Corley et al. (2020)). The new genus contains M. mediterranella (Nel & Varenne, 2012) and M. atlanticella Corley & Rosete, 2020, a new Portuguese endemic species, described based on differences found in the male and female genitalia and on DNA barcodes. Specimens were detected and captured using mercury-vapor lamps to attract the insects. Captured specimens were identified to species level and preserved in 96% ethanol. A tissue sample, a leg, was collected from each individual, from which DNA was extracted. The DNA barcoding of these specimens was conducted within the InBIO Barcoding Initiative (IBI), funded by EnvMetaGen and PORBIOTA projects. DNA barcode sequences were deposited in BOLD (Barcode of Life Data System) online database. DNA extracts are deposited in the IBI collection at the CIBIO (Research Center in Biodiversity and Genetic Resources).

資料紀錄

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此 IPT 存放資料以提供資料儲存庫服務。資料與資源的詮釋資料可由「下載」單元下載。「版本」表格列出此資源的其它公開版本,以便利追蹤其隨時間的變更。

版本

以下的表格只顯示可公開存取資源的已發布版本。

如何引用

研究者應依照以下指示引用此資源。:

Corley M, Ferreira S, Rosete J, Sousa P, Beja P (2020): The InBIO Barcoding Initiative Database: Mondeguina, a new genus for Apatetris mediterranella Nel & Varenne, 2012, with description of a new species from Portugal (Lepidoptera, Gelechiidae). v1.1. CIBIO (Research Center in Biodiversity and Genetic Resources) Portugal. Dataset/Occurrence. https://doi.org/10.15468/au3pbu

權利

研究者應尊重以下權利聲明。:

此資料的發布者及權利單位為 CIBIO (Research Center in Biodiversity and Genetic Resources) Portugal。 This work is licensed under a Creative Commons Attribution (CC-BY 4.0) License.

GBIF 註冊

此資源已向GBIF註冊,並指定以下之GBIF UUID: 2c5df391-3d22-4c92-b039-bed10c1f62c0。  CIBIO (Research Center in Biodiversity and Genetic Resources) Portugal 發佈此資源,並經由GBIF Portugal同意向GBIF註冊成為資料發佈者。

關鍵字

Lepidoptera; Species; Occurrence; Cytochrome c oxidase I (COI); DNA barcode; Continental Portugal; Occurrence

聯絡資訊

Martin Corley
  • 元數據提供者
  • 出處
Researcher
Pucketty Farm Cottage
SN7 8JP Faringdon
Oxfordshire
PT
Sónia Ferreira
  • 元數據提供者
  • 出處
  • 連絡人
Post-Doc Researcher
CIBIO-InBIO, Centro de Investigação em Biodiversidade e Recursos Genéticos, Universidade do Porto
Campus Agrário de Vairão, Rua Padre Armando Quintas, nº 7
4485-661 Vairão
Porto
PT
+351 252660411
Jorge Rosete
  • 元數據提供者
  • 出處
Researcher
Rua Manuel Cerqueira Nobrega
3105-165 Louriçal, Pombal
Leiria
PT
Pedro Sousa
  • 元數據提供者
  • 出處
Post-Doc Researcher
CIBIO-InBIO, Centro de Investigação em Biodiversidade e Recursos Genéticos, Universidade do Porto
Campus Agrário de Vairão, Rua Padre Armando Quintas, nº 7
4485-661 Vairão
Porto
PT
+351 252660411
Pedro Beja
  • 元數據提供者
  • 出處
  • 連絡人
Coordinating Researcher
CIBIO-InBIO, Centro de Investigação em Biodiversidade e Recursos Genéticos, Universidade do Porto
Campus Agrário de Vairão, Rua Padre Armando Quintas, nº 7
4485-661 Vairão
Porto
PT
+351 252660411

地理涵蓋範圍

Continental Portugal.

界定座標範圍 緯度南界 經度西界 [39.68, -8.871], 緯度北界 經度東界 [40.135, -7.098]

分類群涵蓋範圍

This dataset is composed of data relating to three Lepidoptera specimens. All specimens were determined to species level. Specimens belong to the genera Mondeguina Corley & Rosete, 2020 and Catatinagma Rebel, 1903, and the family Gelechiidae.

Kingdom Animalia
Phylum Arthropoda
Class Insecta
Order Lepidoptera
Family Gelechiidae

時間涵蓋範圍

起始日期 / 結束日期 2015-06-23 / 2018-05-14

計畫資料

The InBIO Barcoding Initiative aims to develop a reference collection of DNA barcoding sequences covering Portuguese invertebrate taxa. Within the project, a special focus is afforded to insects, given their relevance to food webs, ecosystems functioning, high diversity and limited number of DNA barcoding sequences of interest.

計畫名稱 The InBIO Barcoding Initiative Database: Mondeguina, a new genus for Apatetris mediterranella Nel & Varenne, 2012, with description of a new species from Portugal (Lepidoptera, Gelechiidae)
辨識碼 InBIO Barcoding Initiative
經費來源 InBIO Barcoding Initiative is funded by the European Union’s Horizon 2020 Research and Innovation programme under grant agreement No 668981 and by the project PORBIOTA — Portuguese E-Infrastructure for Information and Research on Biodiversity (POCI-01-0145-FEDER-022127), supported by Operational Thematic Program for Competitiveness and Internationalization (POCI), under the PORTUGAL 2020 Partnership Agreement, through the European Regional Development Fund (FEDER).
研究區域描述 Specimens were collected in continental Portugal, in a total of three different localities. Sampling was conducted from 2015 to 2018.
研究設計描述 Specimens in this dataset were collected in field work carried out between 2015 to 2018. Specimens were captured using mercury-vapor lamps to attract the insects.

參與計畫的人員:

取樣方法

Sampling of specimens was done at three different localities of continental Portugal. Sampling was conducted between 2015 to 2018. Captured specimens were preserved in 96% and morphologically identified. DNA extracts are deposited in the InBIO Barcoding Initiative reference collection for downstream molecular analysis.

研究範圍 Specimens were collected in three different localities of continental Portugal. Sampling was conducted from 2015 to 2018.
品質控管 The DNA barcoded specimen morphological identification was contrasted with the results of the Blast of the newly generated DNA barcode in BOLD Identification Engine. Prior submission to GBIF, data was checked for errors and inconsistencies with OpenRefine 3.3 (http://openrefine.org/).

方法步驟描述:

  1. Sampling of specimens was done at three different localities of continental Portugal, between 2015 and 2018. Specimens were detected and captured at night by using mercury-vapor lamps as lures, although part of the specimens were collected a few metres away from the light, resting on grasses.
  2. The captured specimens were preserved in 96% ethanol.
  3. The specimens were morphologically identified using a binocular stereoscopic microscope and resorting to available literature (Corley, Rosete & Ferreira, 2017; Gozmány, 1954; Janse, 1949–1954, Junnilainen & Nupponen, 2010; Nel & Varenne, 2012; Sakamaki, 2000; Staudinger, 1880).
  4. DNA barcodes were sequenced from all specimens. For this, one leg was removed from each individual from which a 658 bp COI DNA barcode fragment was extracted, amplified and sequenced.
  5. The obtained sequences were submitted to BOLD database and the specimens’ morphological identification was contrasted with the results of the BLAST of the newly generated DNA barcode in BOLD Identification Engine.
  6. Prior submission to GBIF, data was checked for errors and inconsistencies with OpenRefine 3.3 (http://openrefine.org/).

收藏資料

蒐藏名稱 InBIO Barcoding Initiative
蒐藏編號 4ec2b246-f5fa-4b90-9a8d-ddafc2a3f970
上層採集品識別碼 CIBIO (Research Center in Biodiversity and Genetic Resources) Portugal
標本保存方法 Alcohol
管理單位 在...之間 1 和 3 Voucher tube ,  在...之間 1 和 3 DNA extractions

引用文獻

  1. Corley, M.F.V., Rosete, J. & Ferreira, S. (2017). Mondeguina, a new genus for Apatetris mediterranella Nel & Varenne, 2012, with description of a new species from Portugal (Lepidoptera, Gelechiidae). Nota Lepidopterologica, 43: 151–166. https://doi.org/10.3897/nl.43.50430
  2. Gozmány, L.A. (1954). Studies on Microlepidoptera. Annales Historico-naturales Musei Nationalis Hungarici 5: 273–285.
  3. Janse, A.J.T. (1949–1954). The Moths of South Africa 5. Transvaal Museum, Pretoria, Gelechiadae iv + 464 pp. 202 pls.]
  4. Junnilainen, J. & Nupponen, K. (2010). The gelechiid fauna of the southern Ural Mountains, part I: descriptions of seventeen new species (Lepidoptera: Gelechiidae). Zootaxa 2366: 1–34. https://doi.org/10.11646/zootaxa.2366.1.1
  5. Nel, J. & Varenne, T. (2012). Description d’Apatetris (s. l.) mediterranella sp. n. du littoral méditerranéen de France et d’Italie (Gelechiidae, Gelechiinae, Apatetrini). Nota lepidopterologica 35: 27–32.
  6. Sakamaki, Y. (2000). Japanese species of the genus Apatetris (Lepidoptera, Gelechiidae). Tijdschrift voor Entomologie 143: 211–220. https://doi.org/10.1163/22119434-99900046
  7. Staudinger, O. (1880). Lepidopteren-Fauna Kleinasien’s. Horae Societatis Entomologicae Rossicae 15: 159–435.

額外的詮釋資料

目的 The InBIO Barcoding Initiative (IBI) aims to develop a reference collection of DNA barcoding sequences primarily covering Portuguese invertebrate taxa providing a tool in ecological studies.
替代的識別碼 2c5df391-3d22-4c92-b039-bed10c1f62c0
http://ipt.gbif.pt/ipt/resource?r=ibi_lepidoptera_mondeguina