Описание
The dataset contains three records of moth specimens of the family Gelechiidae collected from 2015 to 2018 in continental Portugal. The study of these specimens resulted in the description of a new genus, Mondeguina Corley & Rosete, 2020, a new species M. atlanticella Corley & Rosete, 2020, and a new genus placement for Catatinagma agenjoi (Gozmány, 1954) previously in the genus Apatetris Staudinger, 1880 (Corley et al. (2020)). The new genus contains M. mediterranella (Nel & Varenne, 2012) and M. atlanticella Corley & Rosete, 2020, a new Portuguese endemic species, described based on differences found in the male and female genitalia and on DNA barcodes. Specimens were detected and captured using mercury-vapor lamps to attract the insects. Captured specimens were identified to species level and preserved in 96% ethanol. A tissue sample, a leg, was collected from each individual, from which DNA was extracted. The DNA barcoding of these specimens was conducted within the InBIO Barcoding Initiative (IBI), funded by EnvMetaGen and PORBIOTA projects. DNA barcode sequences were deposited in BOLD (Barcode of Life Data System) online database. DNA extracts are deposited in the IBI collection at the CIBIO (Research Center in Biodiversity and Genetic Resources).
Записи данных
Данные этого occurrence ресурса были опубликованы в виде Darwin Core Archive (DwC-A), который является стандартным форматом для обмена данными о биоразнообразии в виде набора из одной или нескольких таблиц. Основная таблица данных содержит 3 записей.
Данный экземпляр IPT архивирует данные и таким образом служит хранилищем данных. Данные и метаданные ресурсов доступны для скачивания в разделе Загрузки. В таблице версий перечислены другие версии ресурса, которые были доступны публично, что позволяет отслеживать изменения, внесенные в ресурс с течением времени.
Версии
В таблице ниже указаны только опубликованные версии ресурса, которые доступны для свободного скачивания.
Как оформить ссылку
Исследователи должны дать ссылку на эту работу следующим образом:
Corley M, Ferreira S, Rosete J, Sousa P, Beja P (2020): The InBIO Barcoding Initiative Database: Mondeguina, a new genus for Apatetris mediterranella Nel & Varenne, 2012, with description of a new species from Portugal (Lepidoptera, Gelechiidae). v1.1. CIBIO (Research Center in Biodiversity and Genetic Resources) Portugal. Dataset/Occurrence. https://doi.org/10.15468/au3pbu
Права
Исследователи должны соблюдать следующие права:
Публикующей организацией и владельцем прав на данную работу является CIBIO (Research Center in Biodiversity and Genetic Resources) Portugal. Эта работа находится под лицензией Creative Commons Attribution (CC-BY 4.0).
Регистрация в GBIF
Этот ресурс был зарегистрирован в GBIF, ему был присвоен следующий UUID: 2c5df391-3d22-4c92-b039-bed10c1f62c0. CIBIO (Research Center in Biodiversity and Genetic Resources) Portugal отвечает за публикацию этого ресурса, и зарегистрирован в GBIF как издатель данных при оподдержке GBIF Portugal.
Ключевые слова
Lepidoptera; Species; Occurrence; Cytochrome c oxidase I (COI); DNA barcode; Continental Portugal; Occurrence
Контакты
- Metadata Provider ●
- Originator
http://orcid.org/0000-0003-4240-8007
- Metadata Provider ●
- Originator ●
- Point Of Contact
- Metadata Provider ●
- Originator
- Metadata Provider ●
- Originator
- Metadata Provider ●
- Originator ●
- Point Of Contact
Географический охват
Continental Portugal.
| Ограничивающие координаты | Юг Запад [39,68, -8,871], Север Восток [40,135, -7,098] |
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Таксономический охват
This dataset is composed of data relating to three Lepidoptera specimens. All specimens were determined to species level. Specimens belong to the genera Mondeguina Corley & Rosete, 2020 and Catatinagma Rebel, 1903, and the family Gelechiidae.
| Kingdom | Animalia |
|---|---|
| Phylum | Arthropoda |
| Class | Insecta |
| Order | Lepidoptera |
| Family | Gelechiidae |
Временной охват
| Дата начала / Дата окончания | 2015-06-23 / 2018-05-14 |
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Данные проекта
The InBIO Barcoding Initiative aims to develop a reference collection of DNA barcoding sequences covering Portuguese invertebrate taxa. Within the project, a special focus is afforded to insects, given their relevance to food webs, ecosystems functioning, high diversity and limited number of DNA barcoding sequences of interest.
| Название | The InBIO Barcoding Initiative Database: Mondeguina, a new genus for Apatetris mediterranella Nel & Varenne, 2012, with description of a new species from Portugal (Lepidoptera, Gelechiidae) |
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| Идентификатор | InBIO Barcoding Initiative |
| Финансирование | InBIO Barcoding Initiative is funded by the European Union’s Horizon 2020 Research and Innovation programme under grant agreement No 668981 and by the project PORBIOTA — Portuguese E-Infrastructure for Information and Research on Biodiversity (POCI-01-0145-FEDER-022127), supported by Operational Thematic Program for Competitiveness and Internationalization (POCI), under the PORTUGAL 2020 Partnership Agreement, through the European Regional Development Fund (FEDER). |
| Описание района исследования | Specimens were collected in continental Portugal, in a total of three different localities. Sampling was conducted from 2015 to 2018. |
| Описание плана выполнения исследований | Specimens in this dataset were collected in field work carried out between 2015 to 2018. Specimens were captured using mercury-vapor lamps to attract the insects. |
Исполнители проекта:
Методы сбора
Sampling of specimens was done at three different localities of continental Portugal. Sampling was conducted between 2015 to 2018. Captured specimens were preserved in 96% and morphologically identified. DNA extracts are deposited in the InBIO Barcoding Initiative reference collection for downstream molecular analysis.
| Охват исследования | Specimens were collected in three different localities of continental Portugal. Sampling was conducted from 2015 to 2018. |
|---|---|
| Контроль качества | The DNA barcoded specimen morphological identification was contrasted with the results of the Blast of the newly generated DNA barcode in BOLD Identification Engine. Prior submission to GBIF, data was checked for errors and inconsistencies with OpenRefine 3.3 (http://openrefine.org/). |
Описание этапа методики:
- Sampling of specimens was done at three different localities of continental Portugal, between 2015 and 2018. Specimens were detected and captured at night by using mercury-vapor lamps as lures, although part of the specimens were collected a few metres away from the light, resting on grasses.
- The captured specimens were preserved in 96% ethanol.
- The specimens were morphologically identified using a binocular stereoscopic microscope and resorting to available literature (Corley, Rosete & Ferreira, 2017; Gozmány, 1954; Janse, 1949–1954, Junnilainen & Nupponen, 2010; Nel & Varenne, 2012; Sakamaki, 2000; Staudinger, 1880).
- DNA barcodes were sequenced from all specimens. For this, one leg was removed from each individual from which a 658 bp COI DNA barcode fragment was extracted, amplified and sequenced.
- The obtained sequences were submitted to BOLD database and the specimens’ morphological identification was contrasted with the results of the BLAST of the newly generated DNA barcode in BOLD Identification Engine.
- Prior submission to GBIF, data was checked for errors and inconsistencies with OpenRefine 3.3 (http://openrefine.org/).
Данные коллекции
| Название коллекции | InBIO Barcoding Initiative |
|---|---|
| Идентификатор коллекции | 4ec2b246-f5fa-4b90-9a8d-ddafc2a3f970 |
| Идентификатор родительской коллекции | CIBIO (Research Center in Biodiversity and Genetic Resources) Portugal |
| Методы сохранения образцов | Alcohol |
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| Единицы хранения | Между 1 и 3 Voucher tube , Между 1 и 3 DNA extractions |
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Библиографические ссылки
- Corley, M.F.V., Rosete, J. & Ferreira, S. (2017). Mondeguina, a new genus for Apatetris mediterranella Nel & Varenne, 2012, with description of a new species from Portugal (Lepidoptera, Gelechiidae). Nota Lepidopterologica, 43: 151–166. https://doi.org/10.3897/nl.43.50430
- Gozmány, L.A. (1954). Studies on Microlepidoptera. Annales Historico-naturales Musei Nationalis Hungarici 5: 273–285.
- Janse, A.J.T. (1949–1954). The Moths of South Africa 5. Transvaal Museum, Pretoria, Gelechiadae iv + 464 pp. 202 pls.]
- Junnilainen, J. & Nupponen, K. (2010). The gelechiid fauna of the southern Ural Mountains, part I: descriptions of seventeen new species (Lepidoptera: Gelechiidae). Zootaxa 2366: 1–34. https://doi.org/10.11646/zootaxa.2366.1.1
- Nel, J. & Varenne, T. (2012). Description d’Apatetris (s. l.) mediterranella sp. n. du littoral méditerranéen de France et d’Italie (Gelechiidae, Gelechiinae, Apatetrini). Nota lepidopterologica 35: 27–32.
- Sakamaki, Y. (2000). Japanese species of the genus Apatetris (Lepidoptera, Gelechiidae). Tijdschrift voor Entomologie 143: 211–220. https://doi.org/10.1163/22119434-99900046
- Staudinger, O. (1880). Lepidopteren-Fauna Kleinasien’s. Horae Societatis Entomologicae Rossicae 15: 159–435.
Дополнительные метаданные
| Цель | The InBIO Barcoding Initiative (IBI) aims to develop a reference collection of DNA barcoding sequences primarily covering Portuguese invertebrate taxa providing a tool in ecological studies. |
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| Альтернативные идентификаторы | 2c5df391-3d22-4c92-b039-bed10c1f62c0 |
| http://ipt.gbif.pt/ipt/resource?r=ibi_lepidoptera_mondeguina |