Descripción
The dataset contains one record of the species Cochylimorpha punctiferana (Ragonot, 1881) (Lepidoptera, Tortricidae) collected in continental Portugal in 2016.The study of this specimen resulted in the resurrection of the Portuguese endemic species C. punctiferana from synonymy with C. discopunctana (Eversmann, 1844) based on clear differences in female genitalia and DNA barcode by Corley et al. (2020). A tissue sample, one leg, was removed to be used for DNA extraction. Sequencing of the 658 bp COI DNA barcode was conducted within the InBIO Barcoding Initiative (IBI) and the DNA sequence was submitted to BOLD (Barcode of Life Data System) and GenBank databases. The preserved specimen and DNA extract are deposited in the IBI collection at the CIBIO (Research Center in Biodiversity and Genetic Resources).
Registros
Los datos en este recurso de registros biológicos han sido publicados como Archivo Darwin Core(DwC-A), el cual es un formato estándar para compartir datos de biodiversidad como un conjunto de una o más tablas de datos. La tabla de datos del core contiene 1 registros.
Este IPT archiva los datos y, por lo tanto, sirve como repositorio de datos. Los datos y los metadatos del recurso están disponibles para su descarga en la sección descargas. La tabla versiones enumera otras versiones del recurso que se han puesto a disposición del público y permite seguir los cambios realizados en el recurso a lo largo del tiempo.
Versiones
La siguiente tabla muestra sólo las versiones publicadas del recurso que son de acceso público.
¿Cómo referenciar?
Los usuarios deben citar este trabajo de la siguiente manera:
Corley M, Ferreira S, Sousa P, Beja P (2020): The InBIO Barcoding Initiative Database: Taxonomic notes on Portuguese Microlepidoptera II. Cochylimorpha punctiferana (Ragonot, 1881). v1.0. CIBIO (Research Center in Biodiversity and Genetic Resources) Portugal. Dataset/Occurrence. https://doi.org/10.15468/4u34gh
Derechos
Los usuarios deben respetar los siguientes derechos de uso:
El publicador y propietario de los derechos de este trabajo es CIBIO (Research Center in Biodiversity and Genetic Resources) Portugal. Esta obra está bajo una licencia Creative Commons de Atribución/Reconocimiento (CC-BY 4.0).
Registro GBIF
Este recurso ha sido registrado en GBIF con el siguiente UUID: 3f23468a-fdd7-4327-8178-5bafc023eb40. CIBIO (Research Center in Biodiversity and Genetic Resources) Portugal publica este recurso y está registrado en GBIF como un publicador de datos avalado por GBIF Portugal.
Palabras clave
Lepidoptera; Species; Occurrence; Cytochrome c oxidase I (COI); DNA barcode; Continental Portugal; Occurrence
Contactos
- Proveedor De Los Metadatos ●
- Originador
http://orcid.org/0000-0003-4240-8007
- Proveedor De Los Metadatos ●
- Originador ●
- Punto De Contacto
- Proveedor De Los Metadatos
- Proveedor De Los Metadatos ●
- Originador ●
- Punto De Contacto
- Proveedor De Los Metadatos
Cobertura geográfica
Continental Portugal.
| Coordenadas límite | Latitud Mínima Longitud Mínima [40,326, -7,573], Latitud Máxima Longitud Máxima [41,766, -6,902] |
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Cobertura taxonómica
This dataset is composed of one specimen identified as Cochylimorpha punctiferana (Ragonot, 1881) (Lepidoptera, Tortricidae), a moth species.
| Reino | Animalia |
|---|---|
| Filo | Arthropoda |
| Class | Insecta |
| Orden | Lepidoptera |
| Familia | Tortricidae |
Cobertura temporal
| Fecha Inicial | 2016-04-24 |
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Datos del proyecto
The InBIO Barcoding Initiative aims to develop a reference collection of DNA barcoding sequences covering Portuguese invertebrate taxa. Within the project, a special focus is afforded to insects, given their relevance to food webs, ecosystems functioning, high diversity and limited number of DNA barcoding sequences of interest.
| Título | The InBIO Barcoding Initiative Database: Taxonomic notes on Portuguese Microlepidoptera II. Cochylimorpha punctiferana (Ragonot, 1881) |
|---|---|
| Identificador | InBIO Barcoding Initiative |
| Fuentes de Financiación | InBIO Barcoding Initiative is funded by the European Union’s Horizon 2020 Research and Innovation programme under grant agreement No 668981 and by the project PORBIOTA — Portuguese E-Infrastructure for Information and Research on Biodiversity (POCI-01-0145-FEDER-022127), supported by Operational Thematic Program for Competitiveness and Internationalization (POCI), under the PORTUGAL 2020 Partnership Agreement, through the European Regional Development Fund (FEDER). |
| Descripción del área de estudio | A single specimen was collected in Vale da Porca, Macedo de Cavaleiros, part of the Bragança district of Continental Portugal, in 2016. |
| Descripción del diseño | The specimen in this dataset was collected in a single locality in Continental Portugal. |
Personas asociadas al proyecto:
Métodos de muestreo
The Cochylimorpha punctiferana specimen was captured in continental Portugal in 2016. The captured specimen was preserved in 96% ethanol and stored at the InBIO Barcoding Initiative reference collection for downstream molecular analysis. The collected specimen was morphologically identified.
| Área de Estudio | A single specimen was collected in Vale da Porca, in Continental Portugal, in 2016. |
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| Control de Calidad | The DNA barcoded specimen morphological identification was contrasted with the results of the Blast of the newly generated DNA barcode in BOLD Identification Engine. Prior submission to GBIF, data was checked for errors and inconsistencies with OpenRefine 3.3 (http://openrefine.org/). |
Descripción de la metodología paso a paso:
- The Cochylimorpha punctiferana specimen was captured in a single locality of continental Portugal, in 2016.
- The captured specimen was preserved in 96% ethanol.
- The specimen was morphologically identified using a binocular stereoscopic microscope and resorting to available literature (CORLEY & FERREIRA, 2020; KENNEL, 1908-1921, 1913; RAGONOT, 1881; RAZOWSKI, 1970; RAZOWSKI, 2002, 2009).
- A DNA barcode was sequenced from a tissue sample, one leg, that was removed. DNA was then extracted, and a 658 bp COI DNA barcode fragment was amplified and sequenced.
- The obtained sequence was submitted to BOLD and GenBank databases and the specimen morphological identification was contrasted with the results of the BLAST of the newly generated DNA barcode in BOLD Identification Engine.
- Prior submission to GBIF, data was checked for errors and inconsistencies with OpenRefine 3.3 (http://openrefine.org/).
Datos de la colección
| Nombre de la Colección | InBIO Barcoding Initiative |
|---|---|
| Identificador de la Colección | 4ec2b246-f5fa-4b90-9a8d-ddafc2a3f970 |
| Identificador de la Colección Parental | CIBIO (Research Center in Biodiversity and Genetic Resources) Portugal |
| Métodos de preservación de los ejemplares | Alcohol |
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| Unidades curatoriales | Entre 1 y 1 Voucher tube , Entre 1 y 1 DNA extractions |
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Referencias bibliográficas
- CORLEY, M. F. V. & FERREIRA, S., 2020. Taxonomic notes on Portuguese Microlepidoptera II. Cochylimorpha punctiferana (Ragonot, 1881) stat. rev., a neglected Portuguese species (Lepidoptera: Tortricidae). SHILAP Revista de Lepidopterología, 48 (189): 147-151.
- KENNEL, J., 1908-1921. Die palaearktischen Tortriciden.– Zoologica, 21(54): 1-742.
- KENNEL, J., 1913. Die palaearktischen Tortriciden 3.– Zoologica, 21(54): 233-397.
- RAGONOT, E. L., 1881. Notes on the entomology of Portugal. IV. Lepidoptera (continued). Micro-lepidoptera (except Tineina) collected by the Rev. A. E. Eaton in 1880 with descriptions of new species.– Entomologist’s Monthly Magazine, 17: 229-233.
- RAZOWSKI, J., 1970. Cochylidae.– In H. G. AMSEL, F. GREGOR & H. REISSER, (Eds.). Microlepidoptera Palaearctica, 3: XIV - 528 pp., 161 pls. Verlag Georg Fromme & Co. Wien.
- RAZOWSKI, J., 2002. Tortricidae of Europe. Olethreutinae, 2: 319 pp. Frantisek Slamka, Bratislava.
- RAZOWSKI, J., 2009. Tortricidae of the Palaearctic Region. Cochylini, 2: 1-195 pp. Frantisek Slamka, Bratislava.
Metadatos adicionales
| Propósito | The InBIO Barcoding Initiative (IBI) aims to develop a reference collection of DNA barcoding sequences primarily covering Portuguese invertebrate taxa providing a tool in ecological studies. |
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| Identificadores alternativos | 3f23468a-fdd7-4327-8178-5bafc023eb40 |
| http://ipt.gbif.pt/ipt/resource?r=ibi_lepidoptera_cochylimorph |