Описание
The dataset contains one record of the species Cochylimorpha punctiferana (Ragonot, 1881) (Lepidoptera, Tortricidae) collected in continental Portugal in 2016.The study of this specimen resulted in the resurrection of the Portuguese endemic species C. punctiferana from synonymy with C. discopunctana (Eversmann, 1844) based on clear differences in female genitalia and DNA barcode by Corley et al. (2020). A tissue sample, one leg, was removed to be used for DNA extraction. Sequencing of the 658 bp COI DNA barcode was conducted within the InBIO Barcoding Initiative (IBI) and the DNA sequence was submitted to BOLD (Barcode of Life Data System) and GenBank databases. The preserved specimen and DNA extract are deposited in the IBI collection at the CIBIO (Research Center in Biodiversity and Genetic Resources).
Записи данных
Данные этого occurrence ресурса были опубликованы в виде Darwin Core Archive (DwC-A), который является стандартным форматом для обмена данными о биоразнообразии в виде набора из одной или нескольких таблиц. Основная таблица данных содержит 1 записей.
Данный экземпляр IPT архивирует данные и таким образом служит хранилищем данных. Данные и метаданные ресурсов доступны для скачивания в разделе Загрузки. В таблице версий перечислены другие версии ресурса, которые были доступны публично, что позволяет отслеживать изменения, внесенные в ресурс с течением времени.
Версии
В таблице ниже указаны только опубликованные версии ресурса, которые доступны для свободного скачивания.
Как оформить ссылку
Исследователи должны дать ссылку на эту работу следующим образом:
Corley M, Ferreira S, Sousa P, Beja P (2020): The InBIO Barcoding Initiative Database: Taxonomic notes on Portuguese Microlepidoptera II. Cochylimorpha punctiferana (Ragonot, 1881). v1.0. CIBIO (Research Center in Biodiversity and Genetic Resources) Portugal. Dataset/Occurrence. https://doi.org/10.15468/4u34gh
Права
Исследователи должны соблюдать следующие права:
Публикующей организацией и владельцем прав на данную работу является CIBIO (Research Center in Biodiversity and Genetic Resources) Portugal. Эта работа находится под лицензией Creative Commons Attribution (CC-BY 4.0).
Регистрация в GBIF
Этот ресурс был зарегистрирован в GBIF, ему был присвоен следующий UUID: 3f23468a-fdd7-4327-8178-5bafc023eb40. CIBIO (Research Center in Biodiversity and Genetic Resources) Portugal отвечает за публикацию этого ресурса, и зарегистрирован в GBIF как издатель данных при оподдержке GBIF Portugal.
Ключевые слова
Lepidoptera; Species; Occurrence; Cytochrome c oxidase I (COI); DNA barcode; Continental Portugal; Occurrence
Контакты
- Metadata Provider ●
- Originator
http://orcid.org/0000-0003-4240-8007
- Metadata Provider ●
- Originator ●
- Point Of Contact
- Metadata Provider
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Географический охват
Continental Portugal.
| Ограничивающие координаты | Юг Запад [40,326, -7,573], Север Восток [41,766, -6,902] |
|---|
Таксономический охват
This dataset is composed of one specimen identified as Cochylimorpha punctiferana (Ragonot, 1881) (Lepidoptera, Tortricidae), a moth species.
| Kingdom | Animalia |
|---|---|
| Phylum | Arthropoda |
| Class | Insecta |
| Order | Lepidoptera |
| Family | Tortricidae |
Временной охват
| Дата начала | 2016-04-24 |
|---|
Данные проекта
The InBIO Barcoding Initiative aims to develop a reference collection of DNA barcoding sequences covering Portuguese invertebrate taxa. Within the project, a special focus is afforded to insects, given their relevance to food webs, ecosystems functioning, high diversity and limited number of DNA barcoding sequences of interest.
| Название | The InBIO Barcoding Initiative Database: Taxonomic notes on Portuguese Microlepidoptera II. Cochylimorpha punctiferana (Ragonot, 1881) |
|---|---|
| Идентификатор | InBIO Barcoding Initiative |
| Финансирование | InBIO Barcoding Initiative is funded by the European Union’s Horizon 2020 Research and Innovation programme under grant agreement No 668981 and by the project PORBIOTA — Portuguese E-Infrastructure for Information and Research on Biodiversity (POCI-01-0145-FEDER-022127), supported by Operational Thematic Program for Competitiveness and Internationalization (POCI), under the PORTUGAL 2020 Partnership Agreement, through the European Regional Development Fund (FEDER). |
| Описание района исследования | A single specimen was collected in Vale da Porca, Macedo de Cavaleiros, part of the Bragança district of Continental Portugal, in 2016. |
| Описание плана выполнения исследований | The specimen in this dataset was collected in a single locality in Continental Portugal. |
Исполнители проекта:
Методы сбора
The Cochylimorpha punctiferana specimen was captured in continental Portugal in 2016. The captured specimen was preserved in 96% ethanol and stored at the InBIO Barcoding Initiative reference collection for downstream molecular analysis. The collected specimen was morphologically identified.
| Охват исследования | A single specimen was collected in Vale da Porca, in Continental Portugal, in 2016. |
|---|---|
| Контроль качества | The DNA barcoded specimen morphological identification was contrasted with the results of the Blast of the newly generated DNA barcode in BOLD Identification Engine. Prior submission to GBIF, data was checked for errors and inconsistencies with OpenRefine 3.3 (http://openrefine.org/). |
Описание этапа методики:
- The Cochylimorpha punctiferana specimen was captured in a single locality of continental Portugal, in 2016.
- The captured specimen was preserved in 96% ethanol.
- The specimen was morphologically identified using a binocular stereoscopic microscope and resorting to available literature (CORLEY & FERREIRA, 2020; KENNEL, 1908-1921, 1913; RAGONOT, 1881; RAZOWSKI, 1970; RAZOWSKI, 2002, 2009).
- A DNA barcode was sequenced from a tissue sample, one leg, that was removed. DNA was then extracted, and a 658 bp COI DNA barcode fragment was amplified and sequenced.
- The obtained sequence was submitted to BOLD and GenBank databases and the specimen morphological identification was contrasted with the results of the BLAST of the newly generated DNA barcode in BOLD Identification Engine.
- Prior submission to GBIF, data was checked for errors and inconsistencies with OpenRefine 3.3 (http://openrefine.org/).
Данные коллекции
| Название коллекции | InBIO Barcoding Initiative |
|---|---|
| Идентификатор коллекции | 4ec2b246-f5fa-4b90-9a8d-ddafc2a3f970 |
| Идентификатор родительской коллекции | CIBIO (Research Center in Biodiversity and Genetic Resources) Portugal |
| Методы сохранения образцов | Alcohol |
|---|
| Единицы хранения | Между 1 и 1 Voucher tube , Между 1 и 1 DNA extractions |
|---|
Библиографические ссылки
- CORLEY, M. F. V. & FERREIRA, S., 2020. Taxonomic notes on Portuguese Microlepidoptera II. Cochylimorpha punctiferana (Ragonot, 1881) stat. rev., a neglected Portuguese species (Lepidoptera: Tortricidae). SHILAP Revista de Lepidopterología, 48 (189): 147-151.
- KENNEL, J., 1908-1921. Die palaearktischen Tortriciden.– Zoologica, 21(54): 1-742.
- KENNEL, J., 1913. Die palaearktischen Tortriciden 3.– Zoologica, 21(54): 233-397.
- RAGONOT, E. L., 1881. Notes on the entomology of Portugal. IV. Lepidoptera (continued). Micro-lepidoptera (except Tineina) collected by the Rev. A. E. Eaton in 1880 with descriptions of new species.– Entomologist’s Monthly Magazine, 17: 229-233.
- RAZOWSKI, J., 1970. Cochylidae.– In H. G. AMSEL, F. GREGOR & H. REISSER, (Eds.). Microlepidoptera Palaearctica, 3: XIV - 528 pp., 161 pls. Verlag Georg Fromme & Co. Wien.
- RAZOWSKI, J., 2002. Tortricidae of Europe. Olethreutinae, 2: 319 pp. Frantisek Slamka, Bratislava.
- RAZOWSKI, J., 2009. Tortricidae of the Palaearctic Region. Cochylini, 2: 1-195 pp. Frantisek Slamka, Bratislava.
Дополнительные метаданные
| Цель | The InBIO Barcoding Initiative (IBI) aims to develop a reference collection of DNA barcoding sequences primarily covering Portuguese invertebrate taxa providing a tool in ecological studies. |
|---|---|
| Альтернативные идентификаторы | 3f23468a-fdd7-4327-8178-5bafc023eb40 |
| http://ipt.gbif.pt/ipt/resource?r=ibi_lepidoptera_cochylimorph |