出現紀錄

The InBIO Barcoding Initiative Database: Taxonomic notes on Portuguese Microlepidoptera II. Cochylimorpha punctiferana (Ragonot, 1881)

最新版本 由 CIBIO (Research Center in Biodiversity and Genetic Resources) Portugal 發佈於 2021年1月5日 CIBIO (Research Center in Biodiversity and Genetic Resources) Portugal

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說明

The dataset contains one record of the species Cochylimorpha punctiferana (Ragonot, 1881) (Lepidoptera, Tortricidae) collected in continental Portugal in 2016.The study of this specimen resulted in the resurrection of the Portuguese endemic species C. punctiferana from synonymy with C. discopunctana (Eversmann, 1844) based on clear differences in female genitalia and DNA barcode by Corley et al. (2020). A tissue sample, one leg, was removed to be used for DNA extraction. Sequencing of the 658 bp COI DNA barcode was conducted within the InBIO Barcoding Initiative (IBI) and the DNA sequence was submitted to BOLD (Barcode of Life Data System) and GenBank databases. The preserved specimen and DNA extract are deposited in the IBI collection at the CIBIO (Research Center in Biodiversity and Genetic Resources).

資料紀錄

此資源出現紀錄的資料已發佈為達爾文核心集檔案(DwC-A),其以一或多組資料表構成分享生物多樣性資料的標準格式。 核心資料表包含 1 筆紀錄。

此 IPT 存放資料以提供資料儲存庫服務。資料與資源的詮釋資料可由「下載」單元下載。「版本」表格列出此資源的其它公開版本,以便利追蹤其隨時間的變更。

版本

以下的表格只顯示可公開存取資源的已發布版本。

如何引用

研究者應依照以下指示引用此資源。:

Corley M, Ferreira S, Sousa P, Beja P (2020): The InBIO Barcoding Initiative Database: Taxonomic notes on Portuguese Microlepidoptera II. Cochylimorpha punctiferana (Ragonot, 1881). v1.0. CIBIO (Research Center in Biodiversity and Genetic Resources) Portugal. Dataset/Occurrence. https://doi.org/10.15468/4u34gh

權利

研究者應尊重以下權利聲明。:

此資料的發布者及權利單位為 CIBIO (Research Center in Biodiversity and Genetic Resources) Portugal。 This work is licensed under a Creative Commons Attribution (CC-BY 4.0) License.

GBIF 註冊

此資源已向GBIF註冊,並指定以下之GBIF UUID: 3f23468a-fdd7-4327-8178-5bafc023eb40。  CIBIO (Research Center in Biodiversity and Genetic Resources) Portugal 發佈此資源,並經由GBIF Portugal同意向GBIF註冊成為資料發佈者。

關鍵字

Lepidoptera; Species; Occurrence; Cytochrome c oxidase I (COI); DNA barcode; Continental Portugal; Occurrence

聯絡資訊

Martin Corley
  • 元數據提供者
  • 出處
Researcher
Pucketty Farm Cottage
SN7 8JP Faringdon
Oxfordshire
GB
Sónia Ferreira
  • 元數據提供者
  • 出處
  • 連絡人
Post-Doc Researcher
CIBIO-InBIO, Centro de Investigação em Biodiversidade e Recursos Genéticos, Universidade do Porto
Campus Agrário de Vairão, Rua Padre Armando Quintas, nº 7
4485-661 Vairão
Porto
PT
+351 252660411
Pedro Sousa
  • 元數據提供者
Post-Doc Researcher
CIBIO-InBIO, Centro de Investigação em Biodiversidade e Recursos Genéticos, Universidade do Porto
Campus Agrário de Vairão, Rua Padre Armando Quintas, nº 7
4485-661 Vairão
Porto
PT
+351 252660411
Pedro Beja
  • 元數據提供者
  • 出處
  • 連絡人
Coordinating Researcher
CIBIO-InBIO, Centro de Investigação em Biodiversidade e Recursos Genéticos, Universidade do Porto
Campus Agrário de Vairão, Rua Padre Armando Quintas, nº 7
4485-661 Vairão
Porto
PT
+351 252660411
Pedro Sousa
  • 元數據提供者
Coordinating Researcher
CIBIO-InBIO, Centro de Investigação em Biodiversidade e Recursos Genéticos, Universidade do Porto
Campus Agrário de Vairão, Rua Padre Armando Quintas, nº 7
4485-661 Vairão
Porto
PT
+351 252660411

地理涵蓋範圍

Continental Portugal.

界定座標範圍 緯度南界 經度西界 [40.326, -7.573], 緯度北界 經度東界 [41.766, -6.902]

分類群涵蓋範圍

This dataset is composed of one specimen identified as Cochylimorpha punctiferana (Ragonot, 1881) (Lepidoptera, Tortricidae), a moth species.

Kingdom Animalia
Phylum Arthropoda
Class Insecta
Order Lepidoptera
Family Tortricidae

時間涵蓋範圍

起始日期 2016-04-24

計畫資料

The InBIO Barcoding Initiative aims to develop a reference collection of DNA barcoding sequences covering Portuguese invertebrate taxa. Within the project, a special focus is afforded to insects, given their relevance to food webs, ecosystems functioning, high diversity and limited number of DNA barcoding sequences of interest.

計畫名稱 The InBIO Barcoding Initiative Database: Taxonomic notes on Portuguese Microlepidoptera II. Cochylimorpha punctiferana (Ragonot, 1881)
辨識碼 InBIO Barcoding Initiative
經費來源 InBIO Barcoding Initiative is funded by the European Union’s Horizon 2020 Research and Innovation programme under grant agreement No 668981 and by the project PORBIOTA — Portuguese E-Infrastructure for Information and Research on Biodiversity (POCI-01-0145-FEDER-022127), supported by Operational Thematic Program for Competitiveness and Internationalization (POCI), under the PORTUGAL 2020 Partnership Agreement, through the European Regional Development Fund (FEDER).
研究區域描述 A single specimen was collected in Vale da Porca, Macedo de Cavaleiros, part of the Bragança district of Continental Portugal, in 2016.
研究設計描述 The specimen in this dataset was collected in a single locality in Continental Portugal.

參與計畫的人員:

取樣方法

The Cochylimorpha punctiferana specimen was captured in continental Portugal in 2016. The captured specimen was preserved in 96% ethanol and stored at the InBIO Barcoding Initiative reference collection for downstream molecular analysis. The collected specimen was morphologically identified.

研究範圍 A single specimen was collected in Vale da Porca, in Continental Portugal, in 2016.
品質控管 The DNA barcoded specimen morphological identification was contrasted with the results of the Blast of the newly generated DNA barcode in BOLD Identification Engine. Prior submission to GBIF, data was checked for errors and inconsistencies with OpenRefine 3.3 (http://openrefine.org/).

方法步驟描述:

  1. The Cochylimorpha punctiferana specimen was captured in a single locality of continental Portugal, in 2016.
  2. The captured specimen was preserved in 96% ethanol.
  3. The specimen was morphologically identified using a binocular stereoscopic microscope and resorting to available literature (CORLEY & FERREIRA, 2020; KENNEL, 1908-1921, 1913; RAGONOT, 1881; RAZOWSKI, 1970; RAZOWSKI, 2002, 2009).
  4. A DNA barcode was sequenced from a tissue sample, one leg, that was removed. DNA was then extracted, and a 658 bp COI DNA barcode fragment was amplified and sequenced.
  5. The obtained sequence was submitted to BOLD and GenBank databases and the specimen morphological identification was contrasted with the results of the BLAST of the newly generated DNA barcode in BOLD Identification Engine.
  6. Prior submission to GBIF, data was checked for errors and inconsistencies with OpenRefine 3.3 (http://openrefine.org/).

收藏資料

蒐藏名稱 InBIO Barcoding Initiative
蒐藏編號 4ec2b246-f5fa-4b90-9a8d-ddafc2a3f970
上層採集品識別碼 CIBIO (Research Center in Biodiversity and Genetic Resources) Portugal
標本保存方法 Alcohol
管理單位 在...之間 1 和 1 Voucher tube ,  在...之間 1 和 1 DNA extractions

引用文獻

  1. CORLEY, M. F. V. & FERREIRA, S., 2020. Taxonomic notes on Portuguese Microlepidoptera II. Cochylimorpha punctiferana (Ragonot, 1881) stat. rev., a neglected Portuguese species (Lepidoptera: Tortricidae). SHILAP Revista de Lepidopterología, 48 (189): 147-151.
  2. KENNEL, J., 1908-1921. Die palaearktischen Tortriciden.– Zoologica, 21(54): 1-742.
  3. KENNEL, J., 1913. Die palaearktischen Tortriciden 3.– Zoologica, 21(54): 233-397.
  4. RAGONOT, E. L., 1881. Notes on the entomology of Portugal. IV. Lepidoptera (continued). Micro-lepidoptera (except Tineina) collected by the Rev. A. E. Eaton in 1880 with descriptions of new species.– Entomologist’s Monthly Magazine, 17: 229-233.
  5. RAZOWSKI, J., 1970. Cochylidae.– In H. G. AMSEL, F. GREGOR & H. REISSER, (Eds.). Microlepidoptera Palaearctica, 3: XIV - 528 pp., 161 pls. Verlag Georg Fromme & Co. Wien.
  6. RAZOWSKI, J., 2002. Tortricidae of Europe. Olethreutinae, 2: 319 pp. Frantisek Slamka, Bratislava.
  7. RAZOWSKI, J., 2009. Tortricidae of the Palaearctic Region. Cochylini, 2: 1-195 pp. Frantisek Slamka, Bratislava.

額外的詮釋資料

目的 The InBIO Barcoding Initiative (IBI) aims to develop a reference collection of DNA barcoding sequences primarily covering Portuguese invertebrate taxa providing a tool in ecological studies.
替代的識別碼 3f23468a-fdd7-4327-8178-5bafc023eb40
http://ipt.gbif.pt/ipt/resource?r=ibi_lepidoptera_cochylimorph