Descrição
The dataset contains one record of the species Cochylimorpha punctiferana (Ragonot, 1881) (Lepidoptera, Tortricidae) collected in continental Portugal in 2016.The study of this specimen resulted in the resurrection of the Portuguese endemic species C. punctiferana from synonymy with C. discopunctana (Eversmann, 1844) based on clear differences in female genitalia and DNA barcode by Corley et al. (2020). A tissue sample, one leg, was removed to be used for DNA extraction. Sequencing of the 658 bp COI DNA barcode was conducted within the InBIO Barcoding Initiative (IBI) and the DNA sequence was submitted to BOLD (Barcode of Life Data System) and GenBank databases. The preserved specimen and DNA extract are deposited in the IBI collection at the CIBIO (Research Center in Biodiversity and Genetic Resources).
Registros de Dados
Os dados deste recurso de ocorrência foram publicados como um Darwin Core Archive (DwC-A), que é o formato padronizado para compartilhamento de dados de biodiversidade como um conjunto de uma ou mais tabelas de dados. A tabela de dados do núcleo contém 1 registros.
This IPT archives the data and thus serves as the data repository. The data and resource metadata are available for download in the downloads section. The versions table lists other versions of the resource that have been made publicly available and allows tracking changes made to the resource over time.
Versões
A tabela abaixo mostra apenas versões de recursos que são publicamente acessíveis.
Como citar
Pesquisadores deveriam citar esta obra da seguinte maneira:
Corley M, Ferreira S, Sousa P, Beja P (2020): The InBIO Barcoding Initiative Database: Taxonomic notes on Portuguese Microlepidoptera II. Cochylimorpha punctiferana (Ragonot, 1881). v1.0. CIBIO (Research Center in Biodiversity and Genetic Resources) Portugal. Dataset/Occurrence. https://doi.org/10.15468/4u34gh
Direitos
Pesquisadores devem respeitar a seguinte declaração de direitos:
O editor e o detentor dos direitos deste trabalho é CIBIO (Research Center in Biodiversity and Genetic Resources) Portugal. This work is licensed under a Creative Commons Attribution (CC-BY 4.0) License.
GBIF Registration
Este recurso foi registrado no GBIF e atribuído ao seguinte GBIF UUID: 3f23468a-fdd7-4327-8178-5bafc023eb40. CIBIO (Research Center in Biodiversity and Genetic Resources) Portugal publica este recurso, e está registrado no GBIF como um publicador de dados aprovado por GBIF Portugal.
Palavras-chave
Lepidoptera; Species; Occurrence; Cytochrome c oxidase I (COI); DNA barcode; Continental Portugal; Occurrence
Contatos
- Provedor Dos Metadados ●
- Originador
http://orcid.org/0000-0003-4240-8007
- Provedor Dos Metadados ●
- Originador ●
- Ponto De Contato
- Provedor Dos Metadados
- Provedor Dos Metadados ●
- Originador ●
- Ponto De Contato
- Provedor Dos Metadados
Cobertura Geográfica
Continental Portugal.
| Coordenadas delimitadoras | Sul Oeste [40,326, -7,573], Norte Leste [41,766, -6,902] |
|---|
Cobertura Taxonômica
This dataset is composed of one specimen identified as Cochylimorpha punctiferana (Ragonot, 1881) (Lepidoptera, Tortricidae), a moth species.
| Reino | Animalia |
|---|---|
| Filo | Arthropoda |
| Class | Insecta |
| Ordem | Lepidoptera |
| Família | Tortricidae |
Cobertura Temporal
| Data Inicial | 2016-04-24 |
|---|
Dados Sobre o Projeto
The InBIO Barcoding Initiative aims to develop a reference collection of DNA barcoding sequences covering Portuguese invertebrate taxa. Within the project, a special focus is afforded to insects, given their relevance to food webs, ecosystems functioning, high diversity and limited number of DNA barcoding sequences of interest.
| Título | The InBIO Barcoding Initiative Database: Taxonomic notes on Portuguese Microlepidoptera II. Cochylimorpha punctiferana (Ragonot, 1881) |
|---|---|
| Identificador | InBIO Barcoding Initiative |
| Financiamento | InBIO Barcoding Initiative is funded by the European Union’s Horizon 2020 Research and Innovation programme under grant agreement No 668981 and by the project PORBIOTA — Portuguese E-Infrastructure for Information and Research on Biodiversity (POCI-01-0145-FEDER-022127), supported by Operational Thematic Program for Competitiveness and Internationalization (POCI), under the PORTUGAL 2020 Partnership Agreement, through the European Regional Development Fund (FEDER). |
| Descrição da Área de Estudo | A single specimen was collected in Vale da Porca, Macedo de Cavaleiros, part of the Bragança district of Continental Portugal, in 2016. |
| Descrição do Design | The specimen in this dataset was collected in a single locality in Continental Portugal. |
O pessoal envolvido no projeto:
Métodos de Amostragem
The Cochylimorpha punctiferana specimen was captured in continental Portugal in 2016. The captured specimen was preserved in 96% ethanol and stored at the InBIO Barcoding Initiative reference collection for downstream molecular analysis. The collected specimen was morphologically identified.
| Área de Estudo | A single specimen was collected in Vale da Porca, in Continental Portugal, in 2016. |
|---|---|
| Controle de Qualidade | The DNA barcoded specimen morphological identification was contrasted with the results of the Blast of the newly generated DNA barcode in BOLD Identification Engine. Prior submission to GBIF, data was checked for errors and inconsistencies with OpenRefine 3.3 (http://openrefine.org/). |
Descrição dos passos do método:
- The Cochylimorpha punctiferana specimen was captured in a single locality of continental Portugal, in 2016.
- The captured specimen was preserved in 96% ethanol.
- The specimen was morphologically identified using a binocular stereoscopic microscope and resorting to available literature (CORLEY & FERREIRA, 2020; KENNEL, 1908-1921, 1913; RAGONOT, 1881; RAZOWSKI, 1970; RAZOWSKI, 2002, 2009).
- A DNA barcode was sequenced from a tissue sample, one leg, that was removed. DNA was then extracted, and a 658 bp COI DNA barcode fragment was amplified and sequenced.
- The obtained sequence was submitted to BOLD and GenBank databases and the specimen morphological identification was contrasted with the results of the BLAST of the newly generated DNA barcode in BOLD Identification Engine.
- Prior submission to GBIF, data was checked for errors and inconsistencies with OpenRefine 3.3 (http://openrefine.org/).
Dados de Coleção
| Nome da Coleção | InBIO Barcoding Initiative |
|---|---|
| Identificador da Coleção | 4ec2b246-f5fa-4b90-9a8d-ddafc2a3f970 |
| Identificador da Coleção Parental | CIBIO (Research Center in Biodiversity and Genetic Resources) Portugal |
| Métodos de preservação do espécime | Álcool |
|---|
| Unidades de Curadoria | Entre 1 e 1 Voucher tube , Entre 1 e 1 DNA extractions |
|---|
Citações bibliográficas
- CORLEY, M. F. V. & FERREIRA, S., 2020. Taxonomic notes on Portuguese Microlepidoptera II. Cochylimorpha punctiferana (Ragonot, 1881) stat. rev., a neglected Portuguese species (Lepidoptera: Tortricidae). SHILAP Revista de Lepidopterología, 48 (189): 147-151.
- KENNEL, J., 1908-1921. Die palaearktischen Tortriciden.– Zoologica, 21(54): 1-742.
- KENNEL, J., 1913. Die palaearktischen Tortriciden 3.– Zoologica, 21(54): 233-397.
- RAGONOT, E. L., 1881. Notes on the entomology of Portugal. IV. Lepidoptera (continued). Micro-lepidoptera (except Tineina) collected by the Rev. A. E. Eaton in 1880 with descriptions of new species.– Entomologist’s Monthly Magazine, 17: 229-233.
- RAZOWSKI, J., 1970. Cochylidae.– In H. G. AMSEL, F. GREGOR & H. REISSER, (Eds.). Microlepidoptera Palaearctica, 3: XIV - 528 pp., 161 pls. Verlag Georg Fromme & Co. Wien.
- RAZOWSKI, J., 2002. Tortricidae of Europe. Olethreutinae, 2: 319 pp. Frantisek Slamka, Bratislava.
- RAZOWSKI, J., 2009. Tortricidae of the Palaearctic Region. Cochylini, 2: 1-195 pp. Frantisek Slamka, Bratislava.
Metadados Adicionais
| Propósito | The InBIO Barcoding Initiative (IBI) aims to develop a reference collection of DNA barcoding sequences primarily covering Portuguese invertebrate taxa providing a tool in ecological studies. |
|---|---|
| Identificadores alternativos | 3f23468a-fdd7-4327-8178-5bafc023eb40 |
| http://ipt.gbif.pt/ipt/resource?r=ibi_lepidoptera_cochylimorph |